Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0702 ATGCAAATGAGGTTTCATAAACTGAAACTCTTCTTCTTTTTCCTTTTTATTCTTCTTCTTCTTCCTTTGGTAAAACCTGACTTAACTTCCGAACGCGCCGCCCTCTTAAACCTACGCGCCGCCGTAGGTGGCAGAACCTTTCTCTGGAACACCACCTCTGCAACTCCCTGTAACTGGTCCGGCGTCAAATGCGACCAAAACCACACTCACGTTATCGAGCTTCACCTCCCTGCTGTCTCACTCTCCGGCAAACTCCCCGCCGGCGTATTCTCCGACCTCACTAACCTCCACACACTCAGCCTCCGCTTCAATTCCCTCTCCGGTCCTCTCCCCTCCGACCTCTCCGCTTGCACCTCCCTCCGTAACCTCTACCTCCAGCAGAATCTTCTCTCCGGCGAAATCCCGGCGACACTCCTCCAACTCACCGGTCTAGTCCGTCTGAATTTAGCTTCCAATAACTTCTCCGGCATTATCCCGGTTGGGTTCCAAAACCTAACCCGTTTGAAAACGTTATATCTTCAAAACAACCGGTTCACTGGTTCTCTTACCGAGTTGAACCGGGTTGAACTCGCTCAGTTCAATGTCTCAAACAACATGCTAAATGGTTCAGTTCCTGAAAAGTTACAAACTTTTGGTAAAGATTCGTTTTTGGGTAATAATCTCTTATGTGGAAAACCCCTTAACCGTTGTCCTAATGAAGGAAGTGCAAGTAGTGGAAATGGGGGTGGAAATAGAAATTCTTCTATGGTTGATGATAATCAAGGGCTTGTAAAGAACAAGAAGAAAAGCAAATTATCCGGTGGTGCTATAGCTGGAATTGTTATTGGCTCAGTTGTGGTTCTTTTGTTTCTAGTTTTTGCTTTGATTCTTATATGCAGGAATAGTAATGGTGAAAAAACTAGTTCAATTGATGAAGTTGCTGCAACTTTGAAGCATAATCAGCATGATGAGGGGATTCATAGTGAGAATGTTGGAAATGGAAATGGGTATTCGCCGGCCACAGCTCTGGCGGTGCCGCCGGCTGTGGATGAAGGTGTTGTTGTTGGTGGTGGCGAGAAAAAATTGGTGTTTTTTAGGAATTGGGGTAAAGTGTTTGGTTTGGAGGATTTGTTAAGAGCTTCTGCTGAGGTATTAGGGAAAGGGACTTTTGGGACATCTTATAAGGCTGTTTTGGAGGTTGGTCCTGTGGTTGTGGCTGTGAAGAGATTAAGGGATGTGACCATTTCTGAGAGGGAGTTTAAGGAAAAGATCGAGCGGGTCGGAACGATGGTTCATGAAAATTTAGCACCTCTTAGGGCTTACTATTATAGTAGAGATGAGAAGCTTCTTGTTCATGATTATTTGCATATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGGAGGTAGGACACCTCTGACTTGGGAAATGAGATCAGGCATTGCACTTGGAGCTGCTCGCGGTATCGAATACCTACATTCGCAAGGGCCTAATGTTTCACATGGAAACATAAAATCATCTAACATCCTTCTAACCAAGTCCTATGATGCAAGAGTATCTGATTTCGGTCTCGCACATCTTGTTGGTCCTTCATCCACACCCAACAGGGTAGCCGGCTACCGTGCTCCCGAGGTAACCGATCCTCGAAAAGTTTCTCAGAAAGCCGATGTATACAGCTTCGGTGTACTACTCTTGGAACTTCTTACCGGAAAAGCTCCAACTCACGCTCTCATGAACGACGAAGGAGTGGACCTTCCGAGATGGGTGCAGTCAGTCGTTAAAGAAGAATGGACTTCCGAGGTCTTTGATCTCGAACTCCTAAGATACCAAAATGTCGAAGAGGAAATGGTTCAGCTGTTGCAACTCGCAGTAGATTGTGCAGCAACATACCCTGATAACCGCCCTTCAATGTCGCAAGTACGACAGCACATAGAGGAGTTGCATAAGTCTAGCTTGAAAGAGGGTACTCAAGACCAAATTCAACACCCCGACTTTATCAATGACATAGATGATATCTCTTCTAGATGA 2013 0.4555 MQMRFHKLKLFFFFLFILLLLPLVKPDLTSERAALLNLRAAVGGRTFLWNTTSATPCNWSGVKCDQNHTHVIELHLPAVSLSGKLPAGVFSDLTNLHTLSLRFNSLSGPLPSDLSACTSLRNLYLQQNLLSGEIPATLLQLTGLVRLNLASNNFSGIIPVGFQNLTRLKTLYLQNNRFTGSLTELNRVELAQFNVSNNMLNGSVPEKLQTFGKDSFLGNNLLCGKPLNRCPNEGSASSGNGGGNRNSSMVDDNQGLVKNKKKSKLSGGAIAGIVIGSVVVLLFLVFALILICRNSNGEKTSSIDEVAATLKHNQHDEGIHSENVGNGNGYSPATALAVPPAVDEGVVVGGGEKKLVFFRNWGKVFGLEDLLRASAEVLGKGTFGTSYKAVLEVGPVVVAVKRLRDVTISEREFKEKIERVGTMVHENLAPLRAYYYSRDEKLLVHDYLHMGSLSALLHGNKGGGRTPLTWEMRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALMNDEGVDLPRWVQSVVKEEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAATYPDNRPSMSQVRQHIEELHKSSLKEGTQDQIQHPDFINDIDDISSR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0702 670 Gene3D Ribonuclease Inhibitor 186 234 IPR032675 -
Psa1g0702 670 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Psa1g0702 670 SUPERFAMILY L domain-like 45 227 - -
Psa1g0702 670 Gene3D Transferase(Phosphotransferase) domain 1 448 666 - -
Psa1g0702 670 SMART LRR_typ_2 93 117 IPR003591 -
Psa1g0702 670 SMART LRR_typ_2 141 164 IPR003591 -
Psa1g0702 670 SMART LRR_typ_2 165 188 IPR003591 -
Psa1g0702 670 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 670 - -
Psa1g0702 670 PANTHER OS05G0588300 PROTEIN 6 670 - -
Psa1g0702 670 Pfam Protein kinase domain 375 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0702 670 ProSiteProfiles Protein kinase domain profile. 372 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0702 670 Pfam Leucine rich repeat 137 178 IPR001611 GO:0005515
Psa1g0702 670 Gene3D Phosphorylase Kinase; domain 1 353 447 - -
Psa1g0702 670 SUPERFAMILY Protein kinase-like (PK-like) 376 644 IPR011009 -
Psa1g0702 670 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0702 Psa-Chr1 45746307 45749621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0702 27 659 Receptor kinase-like Gene Family AT1G48480 58.777 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa1g0702 Pkinase 1.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0702 - - gmx:100781597 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0022 7 736606 740156 Psa1g0702 1 45746307 45749621 PCT