Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0701 ATGGTCTTCAAAGGAAGATTCTTCTCTTCCAAAAAATCTGATACTTCTAGTCCAGATGCTTCTTCCAATAGTCCTCGATCAATCTCTTCAAACTCTCCTAGATCCGATAAGAAAAAACCTAAATCAACCGTTGCTCAAACCCTAACTTCCACCTTCACCTCCACCTCCACCGCCGGAACCAGCGGTGGCGGTGGAAGTGGACTTGGCGGCGGATTTATCGGAGGTGCGGCTAGTCGGAAGACGCCAGTTAAGGAAGGAGCTAAGAAGAAAGATGCTGTAAAGGGAAAGGAGAGTGAGATTCTGTCGGAATCTCGCTCTCGTTCTAGTTCGAAGAAATTGACTCCGGCAACGGTGGTGAAGGTGGAGGTGAAGGAGTTACCGTCGACTTTGCCTTCACCGTATTCGTCTTCTTCTGCAGCGGCTTCTGTTTCGCCGATTCTGGCGTCGTCTTTAGGGTTGAACAGGATAAAGACGAGATCGGGACCTTTACCTCAGGAGAGTTTCTTTGGTTTTAGAGGTGATAAGGGAGGAGCTGCAGCGGCACTTGGTGCTAGTAATCTTTCGAGGCCTGGTGTTGGGAAGAAGAAGGAGGTTGGGAATCAGAATAGAGTAGGGTTTCGGGATGGTTTGGGAATTGGTGGTAGTGTTGATAATGGAAGCAATTCGAGTAGTATGTCGACGGGGAGTGGTGCGCAGACGATGGAACAGAGTCCGGTAGTATTGCCTCGTTCGCGGTTGCAGAATGGTGAATCATCTTTGGAAGCAGGAGAGCAGGCATCATCACAGACTCAGACTGAAGGCTTAAGAAGTGAAGATGTTTGCACGCCAGAGGCCACATATGATTTTGAGAATCCGAAAGAATCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCCCCCGGAAAGAGGTTTCCTGGTGATATAAAGAGTTTTTCGCACGAGTTAAATTCTAAAGGTGTCCGGCCTTTTCCGTTTTGGAAGCCTCGAAGGTTAAATAATAACCTTGAGGAGATCTTGGTTGTTATTAGGGCTAAATTCGATAAAGAAAAGGAAGAGGTGAACTCTGAACTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCAGATAATCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCCAGGCGCTGTGCTATGACCACATCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGACTTGGATGATAGGCGTCAAGAGCTTCCTCCGGGGACACTAAAGCAGCTTCATACTCGAATGCTCTTCATTCTTACACGGTGTACTAGGTTGTTGCAATTCCACAAGGAAAGTGCTTTGGCTGAGGATGAACACTTTGTCAATCTCCGTCAATCCAGAGTCTTGCATTCTACTGGAAAATCTATTCCTCCTAGTGTGGTAAGGGATTCTAAAAGTTCTAGTGCTGCAAAGACCTCAAAGGCTTCAACAAAAAAAGCTTATAGCCAAGAGCAGAGTACCATGGGGTGGAAAAAAGGTGTCTTGAAACCAGAAATTCAGTTGCCTCCTGCTGATGATGACATTTTAAAAAACTTTGAGTCTCCTTCTGGCAGGAACCGGATGGCTTCATGGAAAAAATTCCCATCTCCGTCAGGAAAAAGTCCAAAAGAAACTGTTCAATTGAAGGACCGAAGTTATGGCACAGTTGATGTTGAACCTTCAAAGACATCAGATAAGAGATTAAATTCTGATATAGATCTCTCTGCTGCCAAGCCTTCTGAGCTTCTTGCAGTCAAAGATTCCCATGACCATGCTTCCAAGCACCAACACAAAGTTTCTTGGGGATATTGGGGAGACCAGCAGAATAATAATGAAGATAATTCAATAATTTGTCGAATATGTGAAGAGGATGTACCGACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAGAAGGGTCTGAGTGTCAATGAGCGTCTTGTAAGAATTTCTGAAACATTAGAAAAGATGATGGAATCATCTACTCAGAAGGATTCACAACAAATGGTCGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCAAGTATGACCGAAGAATCTGAAGTTCTTTCCCCTAAACTTAGTGATTGGTCACGCAGAGGCTCAGAGGATATGCTAGACTGTTTTCCTGAACCTGATAATTCCGTTTTTATGGATGAGCTAAAGGGATTGCCACTTATATCATGTAGAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCCAGGTCTCCTTTACTGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCTCAGATGAATGAACTTGCTGATATAGCACGATGTGCAGCCAATGTTAGTCTGGATGATGATCGTACAGCGTCGTATTTATTATCATGTCTTGATGATTTGAGGGTTGTCGTAGAACGAAGGAAGTTCGATGCACTTACTGTGGAAACCTTTGGAACACGCATTGAGAAGCTGATTCGTGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATGTAGATAGCCCTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATTCATTCTTCAAAGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAGAAGAGGACGACTGGTGATCTTTTTGCAATAAAGGTTCTTAAGAAAGCAGATATGATCCGTAAGAATGCTGTAGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGATTTTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAATATCTGAATGGTGGAGACTTGTATTCATTACTAAGGAATTTAGGATGTCTAGACGAGGAAGTGGCCCGTGTATATTTGGCTGAAGTGGTTCTTGCATTAGAGTATTTGCATTCATTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCACATGACGGTCATGTCAAGTTGACAGACTTTGGGCTTTCAAAAGTAGGTCTCATCAACAGCACAGATGACTTGTCTGGTCCGGCAGTGAGTGGGACATCCCTACTTGAGGAGGATGAGTCTGAAACATTTACATCGGAGGATCAAAGGGAACGGAGGAAGAAGCGTTCTGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATGGGTATACTGCGGATTGGTGGTCTGTTGGTGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCTGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGAAGTTCCTGAAGAAATGAGTCTTGAAGCACATGATCTTATTGACCGATTGTTGACAGAAGATCCTAATCAAAGACTAGGAGCTAGAGGGGCATCCGAGGTGAAGCAGCATGTTTTCTTCAAGGATATTAACTGGGACACGCTTGCCAGGCAAAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACCAGTTATTTCACTAGTCGCTACTCATGGAATACTTCTGACGGTCTTGTTTACCCGCCAAGTGATTTTGAAGATTCAAGTGATGCCGATAGCTTAAGTGGCAGCAGCAGTTGCCTGAGCAATCGCCATGATGAAGTGGGAGATGAATGTGGGGGTCTTGCCGAGTTTGATTCTAGTTCTTCCGCCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTTTCCCAGCTTGCGTCAATCAATTATGATCTCACCAAGGGATGGAAAGATGATCCCTCAACAAATTCTAGTGCATAG 3966 0.4367 MVFKGRFFSSKKSDTSSPDASSNSPRSISSNSPRSDKKKPKSTVAQTLTSTFTSTSTAGTSGGGGSGLGGGFIGGAASRKTPVKEGAKKKDAVKGKESEILSESRSRSSSKKLTPATVVKVEVKELPSTLPSPYSSSSAAASVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGGAAAALGASNLSRPGVGKKKEVGNQNRVGFRDGLGIGGSVDNGSNSSSMSTGSGAQTMEQSPVVLPRSRLQNGESSLEAGEQASSQTQTEGLRSEDVCTPEATYDFENPKESESPRFQAILRVTSAPGKRFPGDIKSFSHELNSKGVRPFPFWKPRRLNNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGVLEKNADNHPEWQETIEDLLILARRCAMTTSGEFWLQCESIVQDLDDRRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESALAEDEHFVNLRQSRVLHSTGKSIPPSVVRDSKSSSAAKTSKASTKKAYSQEQSTMGWKKGVLKPEIQLPPADDDILKNFESPSGRNRMASWKKFPSPSGKSPKETVQLKDRSYGTVDVEPSKTSDKRLNSDIDLSAAKPSELLAVKDSHDHASKHQHKVSWGYWGDQQNNNEDNSIICRICEEDVPTSHVEDHSRICAVADRCDQKGLSVNERLVRISETLEKMMESSTQKDSQQMVGSPDVAKVSNSSMTEESEVLSPKLSDWSRRGSEDMLDCFPEPDNSVFMDELKGLPLISCRTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCAANVSLDDDRTASYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDVDSPVMDDDVILEDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYLAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHVKLTDFGLSKVGLINSTDDLSGPAVSGTSLLEEDESETFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPEVPEEMSLEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPPSDFEDSSDADSLSGSSSCLSNRHDEVGDECGGLAEFDSSSSANYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA* 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0701 1321 Coils Coil 335 355 - -
Psa1g0701 1321 MobiDBLite consensus disorder prediction 9 31 - -
Psa1g0701 1321 MobiDBLite consensus disorder prediction 1071 1099 - -
Psa1g0701 1321 CDD STKc_MAST_like 916 1204 - -
Psa1g0701 1321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1029 1041 IPR008271 GO:0004672|GO:0006468
Psa1g0701 1321 ProSiteProfiles Protein kinase domain profile. 910 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0701 1321 Gene3D Phosphorylase Kinase; domain 1 908 1228 - -
Psa1g0701 1321 SMART serkin_6 910 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0701 1321 MobiDBLite consensus disorder prediction 211 272 - -
Psa1g0701 1321 MobiDBLite consensus disorder prediction 82 106 - -
Psa1g0701 1321 MobiDBLite consensus disorder prediction 215 270 - -
Psa1g0701 1321 Gene3D Transferase(Phosphotransferase) domain 1 994 1217 - -
Psa1g0701 1321 PANTHER SERINE/THREONINE-PROTEIN KINASE 121 1319 - -
Psa1g0701 1321 SUPERFAMILY Protein kinase-like (PK-like) 907 1243 IPR011009 -
Psa1g0701 1321 Pfam Protein kinase domain 910 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0701 1321 MobiDBLite consensus disorder prediction 472 507 - -
Psa1g0701 1321 MobiDBLite consensus disorder prediction 531 580 - -
Psa1g0701 1321 MobiDBLite consensus disorder prediction 1 114 - -
Psa1g0701 1321 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 121 1319 - -
Psa1g0701 1321 MobiDBLite consensus disorder prediction 42 63 - -
Psa1g0701 1321 ProSiteProfiles AGC-kinase C-terminal domain profile. 1200 1304 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0701 Psa-Chr1 45731517 45744915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0701 71 1315 AGC Kinase Gene Family AT3G17850 66.377 0.0 1621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Psa1g0701 Pkinase 5.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0701 - - cam:101496611 2202.94