Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0699 ATGTATCAAATTCCTTTCTCTGCATTTCAAAACCAAAACCCATTATCAATGCAATTCATCACCCACTCACCACCATCTTCTTCCCCTTTCACCATTGCCACTTCTATGGGATTCACTGCCACCCCTTCAAATCTCACCTTCAAAAAGACTACTTGTTTCCCTTTCTCCTCCACCAGAAACCGCTCCCGTTTTGCCTTAGTTGTCAGAGCCAAAGCTGAAAACGATTACTACTCGACTTTAAATGTTAGCAACAACGCTTCTTTGCAAGAAATCAAGAGCTCTTATCGGAAACTTGCTCGCAAGTACCATCCAGATATGAACAAAAGCCCTGGAGCAGAAGAGAAGTTCAAGGAGATTGGTGCTGCTTACGAGGTTCTATCAGATGATGAGAAAAGATCTCTATATGATCGCTTTGGTGAGTCAGGTCTAGAAGGAGAAAATGGAGGACGCGCCAGTGCCTCAGGGGTTGATCCTTCTGATTTATTCGACGCATTCTTTGGTCGTTCGGAGGGACTATTTAGTGATGAAAGAGGCTTTGGGTTTAATATGAGAAACAGAAACCGTGGCCATGATATTCGGTATGACCTACGTTTGAGCTTTGAAGAATCTATTTTTGGAGGAAAGAGAGAGATAGAAGTTTCTTGTTATGAGGCATGTAATAGTTGTGATGGTACAGGAGCTAAATCAAAGAGTTATATTAAAAAATGCATACATTGCGGTGGCAAAGGAGGAGAGAAGAAAACCGAGAGAACGCCGTTTGGAATGATGTCTCATGTGTCTACATGCTCTAAGTGCGGTGGTCTCGGCATGATAGTCACGGAAAACTGTCGAAAGTGTGATGGCAATGGTTGTGTGCAAGCTAAACGAAAAGTGGAAGTGGTCATTCCTCCCGGCGTCAATGATGGAGACACAATGCAAATTCAAGGAGAAGGGAATTTTGATAAGGAAAGGGATTATACTGGGGATCTTTTTGTTGTCCTCCATGTGAATGAAAAGCGAGGAATTTGGAAAGAGGGTCTCCATTTATACTCAAAGATTAACATTGACTTCACAGAGGCAATACTAGGGTCTGTTAAAAAGGTAGAAACGGTTGAAGGTTTAAGGAATCTCAAAATTCCTTCCGGGATTCAACATGGACATTCAGTGAAACTATCACGTTTGGGAGTTCCAGACAGGAATAAACCATCTATTCGGGGCGATCATTACTTCGTTGTAATTGTTCTTATTCCAAAAGATATCAGTGACACAGAACGCGCACTTCTTGAGAAATTAGCTTCGTTGAGAGCATCTAGAAAAGGCAGTTCGTTTTCTTCTGATGACAGTGGAATATTCAATGATTTCAAGAAGAAGGATACAAAAAGTGATGTCTCAAACAAGGGATCCGAAACTGCAAATTCTCTTTGGGGATCAGTCAAGAACTTCTTAAGGAAAGAAAAATCGGAAGAAAGATTTGCATCAATTAGCCAAGATACATCAACAATGTTGTGGAGATTTGAGCGCCAAAACTATTTAGTTCCACACTCCATTTTTGCTGTTCTATTCATAACATGGATTTTTAACTCTATAGCAAAGTCTAAGAACTTGAAAAGAACCTAA 1596 0.4073 MYQIPFSAFQNQNPLSMQFITHSPPSSSPFTIATSMGFTATPSNLTFKKTTCFPFSSTRNRSRFALVVRAKAENDYYSTLNVSNNASLQEIKSSYRKLARKYHPDMNKSPGAEEKFKEIGAAYEVLSDDEKRSLYDRFGESGLEGENGGRASASGVDPSDLFDAFFGRSEGLFSDERGFGFNMRNRNRGHDIRYDLRLSFEESIFGGKREIEVSCYEACNSCDGTGAKSKSYIKKCIHCGGKGGEKKTERTPFGMMSHVSTCSKCGGLGMIVTENCRKCDGNGCVQAKRKVEVVIPPGVNDGDTMQIQGEGNFDKERDYTGDLFVVLHVNEKRGIWKEGLHLYSKINIDFTEAILGSVKKVETVEGLRNLKIPSGIQHGHSVKLSRLGVPDRNKPSIRGDHYFVVIVLIPKDISDTERALLEKLASLRASRKGSSFSSDDSGIFNDFKKKDTKSDVSNKGSETANSLWGSVKNFLRKEKSEERFASISQDTSTMLWRFERQNYLVPHSIFAVLFITWIFNSIAKSKNLKRT* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0699 531 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Psa1g0699 531 Gene3D DnaJ domain 71 176 IPR036869 -
Psa1g0699 531 SUPERFAMILY HSP40/DnaJ peptide-binding domain 338 421 IPR008971 GO:0006457|GO:0051082
Psa1g0699 531 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Psa1g0699 531 Pfam DnaJ central domain 219 283 IPR001305 GO:0031072|GO:0051082
Psa1g0699 531 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 80 432 - -
Psa1g0699 531 PANTHER EXPRESSED PROTEIN 80 432 - -
Psa1g0699 531 Gene3D - 189 325 - -
Psa1g0699 531 SUPERFAMILY Chaperone J-domain 72 180 IPR036869 -
Psa1g0699 531 CDD DnaJ 75 128 IPR001623 -
Psa1g0699 531 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 286 IPR036410 -
Psa1g0699 531 Pfam DnaJ C terminal domain 192 410 IPR002939 -
Psa1g0699 531 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 329 IPR008971 GO:0006457|GO:0051082
Psa1g0699 531 Gene3D - 219 283 - -
Psa1g0699 531 SMART dnaj_3 74 131 IPR001623 -
Psa1g0699 531 ProSiteProfiles Zinc finger CR-type profile. 206 288 IPR001305 GO:0031072|GO:0051082
Psa1g0699 531 CDD DnaJ_C 191 413 - -
Psa1g0699 531 PRINTS DnaJ domain signature 77 95 IPR001623 -
Psa1g0699 531 PRINTS DnaJ domain signature 95 110 IPR001623 -
Psa1g0699 531 PRINTS DnaJ domain signature 111 131 IPR001623 -
Psa1g0699 531 PRINTS DnaJ domain signature 131 150 IPR001623 -
Psa1g0699 531 Hamap Chaperone protein DnaJ [dnaJ]. 72 450 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Psa1g0699 531 Pfam DnaJ domain 75 136 IPR001623 -
Psa1g0699 531 Gene3D - 335 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0699 Psa-Chr1 45613654 45619990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0699 76 136 C2H2 Transcription Factor Family AT1G74250 44.776 5.53e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0699 K03686 - gmx:100782135 679.478