Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0693 ATGTGTTTCAGACCTCATTGGTTTTGGTGCCTCTATTGCACAATCTACGCCCTAATATTCTTACTCATAACCATCACAATCATTTTCTTGATAATAATCTCTCCCTCAAACGTGAAATTCCACATAACCGACGCTACTCTTACCGAGTTCAACCTCACAGATAACAACTTATATTACAATTTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACATAATAGTCTATTATCGAAGAATCACTGCGGTTGCTTGGTACAAAGACAATGAATTCAGTTATGTGAGTTTGGCACCCTTTGATCAAGGACACAAGAATACGTCATATCTTGGACCTATAGAGTTTAAAGGGAACCGTGTGATCAAACTTGGACGTAAACAACTTGATGAGTATAGCGAAGAGAAGCGTCTCGGGATTTATAATGATTTGGCTGTTGATTTGGATGTTCGAATTAGAGCTAAGTTTGGAAGCTTTTTTAAGACTGGACGGTTTAATCCTCCGGTTGTGCAGTGTCGTCGTTTGAGCATTCCTTTGGTTGCTTCTTCCAAGGGTAACACATCATCATCACCATCAAGGTTTTCTTTTAGAGTCAGAAGATGTAGGACCGGTTCTTTCTTTACAGATCGTGATGCAAATGTGGGAGGAGGAGGAGTAGGAACAGGAGCAGGAATATGA 675 0.4 MCFRPHWFWCLYCTIYALIFLLITITIIFLIIISPSNVKFHITDATLTEFNLTDNNLYYNFKVNITARNPNNNIIVYYRRITAVAWYKDNEFSYVSLAPFDQGHKNTSYLGPIEFKGNRVIKLGRKQLDEYSEEKRLGIYNDLAVDLDVRIRAKFGSFFKTGRFNPPVVQCRRLSIPLVASSKGNTSSSPSRFSFRVRRCRTGSFFTDRDANVGGGGVGTGAGI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0693 224 PANTHER HARPIN-INDUCED 1 17 206 - -
Psa1g0693 224 PANTHER OS05G0367900 PROTEIN 17 206 IPR044839 GO:0098542
Psa1g0693 224 Pfam Late embryogenesis abundant protein 64 165 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0693 Psa-Chr1 45200509 45201685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0693 32 186 SNARE and Associated Proteins AT1G32270 28.846 9.42e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0693 - - mtr:MTR_6g070890 330.872