Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0692 ATGTCTTGTAAACCTGGTTGGGTTGGCACCTTTATGTGCCTCTATTGCACAATATACACCATCATTTTCTTTTTCATTCTTCTCTCTATTATTTTTTGGATAATAATCTCCCCCTCTAGCGTGAAATTTCACGTAACCGACGCAACTCTCACTGAGTTCAACCTCACAAACAACAACAATACATTATATTACAATTTCAAACTCAACGTCACAGTCCGAAACCCCAACAACAATATCATAGTCTATTATCGAAGAATCACCGCATTTGCTTGGTACAAAGACAATAATTTTGGTTTTGTGAGTTTGACACCTTTCGACCAAGGACACAAAAATACAACATTTCTCGGACCGATTGTGTTTAATGGAAATACTAAGATCAAACTAGGGCGTAAACAACTTGATGAGTATAGCGAAGAGATGCGTCTTGGGATTTACAAGGACTTGGCCGTTGATTTTGATATTAAAATTAGAGCTAAGTTTGGAAGCTTTTATAAGAGTGGACGGTTTAATACACCGGTTGTACAGTGTCGTCGTTTGAAAGTTCCTCATCGTCCTCATCATCAACAACATTTTCTTTTAGAGAGAGAAGATGTAGCAGTGCTTCTTTCTTTACAGATCGTGATGCAAATGCAGGAGCTTGATATGTATAATGAATAA 657 0.3729 MSCKPGWVGTFMCLYCTIYTIIFFFILLSIIFWIIISPSSVKFHVTDATLTEFNLTNNNNTLYYNFKLNVTVRNPNNNIIVYYRRITAFAWYKDNNFGFVSLTPFDQGHKNTTFLGPIVFNGNTKIKLGRKQLDEYSEEMRLGIYKDLAVDFDIKIRAKFGSFYKSGRFNTPVVQCRRLKVPHRPHHQQHFLLEREDVAVLLSLQIVMQMQELDMYNE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0692 218 Pfam Late embryogenesis abundant protein 69 168 IPR004864 -
Psa1g0692 218 PANTHER OS05G0367900 PROTEIN 20 182 IPR044839 GO:0098542
Psa1g0692 218 PANTHER HARPIN-INDUCED 1 20 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0692 Psa-Chr1 45014062 45015150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0692 35 182 SNARE and Associated Proteins AT1G32270 31.757 3.40e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0692 - - mtr:MTR_6g070890 278.1