Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0682 ATGAGCAGTGTTGTATATGTAGTATATCAAAGGTTATTATTTCATCTACTCAAAAATAGATATATGGAATCTAAGATGAATAGTTTTGTTCTTGTTGTTGATGATGATGTCAAGTACAAAGAAGAAGAACAAGAACAACAACAACAAAGTGGTGTTCATGAACATGCTGATCATGTAGAGGAGAATAGTGAGATTCTTAAGAGAAGAATCTCTAACCATCCACTTTATGAGTTTCTTGTTGAAGCACACTTGGATTGTTTGAAGGTTGGTGACATTTCTAACTTGGAGATAGAGAAAAAAGACAAGAAGAAAGCAATGAAGAAACAAAACTTGGATATGTTGAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTAATAAGCTAAAAGAGGCAATGGAAGAACCACAACAGAACTCAATGGCTTTCATAAACAACATGCATTCACAACTGAGGGAGCTAACTCAAGCAACCACAACTGCACCTAATGATTCACCTGCTACTACATCTTCAAGTGAAGAAACCCAACATTTCAGAAGAAACCCAACAATTTAA 567 0.3545 MSSVVYVVYQRLLFHLLKNRYMESKMNSFVLVVDDDVKYKEEEQEQQQQSGVHEHADHVEENSEILKRRISNHPLYEFLVEAHLDCLKVGDISNLEIEKKDKKKAMKKQNLDMLSQSELDLFMEAYCLALNKLKEAMEEPQQNSMAFINNMHSQLRELTQATTTAPNDSPATTSSSEETQHFRRNPTI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0682 188 Pfam KNOX1 domain 66 90 IPR005540 GO:0003677|GO:0005634
Psa1g0682 188 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 43 163 - -
Psa1g0682 188 MobiDBLite consensus disorder prediction 162 188 - -
Psa1g0682 188 PANTHER FUSED COMPOUND LEAF 1 43 163 - -
Psa1g0682 188 Coils Coil 92 112 - -
Psa1g0682 188 SMART KNOX2_2 109 160 IPR005541 GO:0003677|GO:0005634
Psa1g0682 188 Pfam KNOX2 domain 116 159 IPR005541 GO:0003677|GO:0005634
Psa1g0682 188 SMART KNOX1_2 64 109 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0682 Psa-Chr1 43889392 43897496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0682 64 180 Homeobox Transcription Factor Family AT4G08150 34.646 5.76e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0682 - - mtr:MTR_6g071190 216.853