Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0644 ATGAACAATATTCACTTTGGAAATGAAAGAGATCAATTTCTGAAGAAGAGGAAATCATATGATGAAACCACCACCAACATGAAAAATTCAAAGAGAAAATTATGCCACAACAATAACAATGAAGAAGAGAAATACGACAACAGCAAGGGATCAGTGTCCACAACACTGAAGCTTTACGATGATCCATGGAAGATAAAGAAGACACTAACCGACAGCGATCTAGGAATCTTGAGCAGACTCTTGTTGGCTGCAGATTTAGTAAAGAAACAAATTTTGCCTATGTTGGATGTTGATGAAGCAAGAGCTGCAGAAACCGAGGAAGGATCCCCGGTTCAGGTTTTCGACATGGAAACAAACACCATGCACGAACTAGTTCTAAAGCGATGGTCTTCGTCCAAGAGTTATGTTCTTATTGGAAAGTGGAATCAAGATTTCGTGAGAAGAAGATTGCTTAAGAAAGGAGATGAAATTGGATTTCAATGGGATCCTTTTAACCGCACTTTCAATTTCTGTGTTCTTAAACGGGCTATGCCCATGTGA 540 0.3907 MNNIHFGNERDQFLKKRKSYDETTTNMKNSKRKLCHNNNNEEEKYDNSKGSVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLDVDEARAAETEEGSPVQVFDMETNTMHELVLKRWSSSKSYVLIGKWNQDFVRRRLLKKGDEIGFQWDPFNRTFNFCVLKRAMPM* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0644 179 Gene3D - 62 176 IPR015300 -
Psa1g0644 179 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 16 175 - -
Psa1g0644 179 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 16 175 - -
Psa1g0644 179 SUPERFAMILY DNA-binding pseudobarrel domain 61 174 IPR015300 -
Psa1g0644 179 MobiDBLite consensus disorder prediction 20 48 - -
Psa1g0644 179 CDD B3_DNA 63 174 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0644 Psa-Chr1 39956280 39957171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0644 65 159 RAV Transcription Factor Family AT1G50680 33.010 7.59e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0644 - - pvu:PHAVU_009G204600g 249.98