Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0614 ATGGAAGACAGAAAAGCTAAAATAATTGTTGCTACATCTGTGATTACAGTGATCATTATCATAACCATTGCTCGTTTTTTGTTCGTCTCCAAGATTTTCTTCCTAATCTGTGGCGCTGGTGTTGCTGTGATCTTTGCAATCTTTGCTTTTGCATTTATCAGCTTAAGCCACAAACGCAGAAGGAGAGTATTGGAATCACAGTTGAAATCCGAAAGTCAAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCTGGGGTTCCAACAAAGTTCAGATACAACGAGCTTGAAGAAGCAACAGATGGATTTCAATCACTTATTGGAAGAGGTTCATCAGCTTCCGTTTTCAAGGGAATTCTGAATGATGGAACTTCAGTTGCTGTGAAAAGAATTGATGCAGAAGAAAGAGGTGAAAGAGAGTTTAAATCAGAAGTTGCAGCAATAGCTAGTGTTCATCATGTGAATCTTGTGAGACTTTTCGGGTACTGTAATTCTTCTTCAGCTCCTAGGTACCTTGTTTATGATTTTATCTCAAATGGGTCATTGGATTGTTGGATTTTTCCCAAAAGGGATTCTCAAAGGCGTCCGCGTCGAAGTGGATGTTTGTCGTGGAATTTGAGGTATAAAGTTGCGGTTGATGTTGCTAAAGGACTTGCATATCTTCACCATGATTGTAGATCAAGGATCTTACACCTTGATATAAAGCCAGAAAATATACTATTGGACGAGAGTTTTAGAGCACTTGTTTCCGATTTCGGGCTATCAAAACTTACTCCTAAAGACGAAAGCCAAGCGATGTCTACGATAAGAGGAACAAGAGGTTACATGGCACCGGAATGGCTTTTAGAAAAAGGCATTTCAGATAAAACAGATGTATATAGTTATGGAATGGTATTACTAGAGATTGTTGGAGGAAGAAAAAATGTTTGTTTAGTGGAAGATGAAAAGTACAAGTCAAAAAGGAAATGGCAATATTTTCCAAAGATTGTAAATGAGAAAGTGAAACAAGGGAAAATAATGGAAATTGTTGATGATAGGTTAATGGAATATGGTGGTGGTGTTGATGAGAATGAGGTGATGAAATTGGTGTATGTTGCTTTATGGTGTGTTCAAGAGAAGCCAAGGTTGAGACCTAGTATGGCTAAAGTGGTAGACATGCTTGAAGGTCGTGTGATGGTGGATCAACCACCTTCTACAAAAATGATTCTTGTTGATTTTCTATGTGATGATAATGATGATGATGATGATGATGTTACAGATAGTAATATTAACATATCAAAGATGGATTCTGTTATGTCTATACAAAGCAATGTGGAATGTAATTCTTCTACCTACTCATATTCCACTACTGTTTTTTCTGGAAGATAG 1371 0.372 MEDRKAKIIVATSVITVIIIITIARFLFVSKIFFLICGAGVAVIFAIFAFAFISLSHKRRRRVLESQLKSESQELRIEYSFLRKVAGVPTKFRYNELEEATDGFQSLIGRGSSASVFKGILNDGTSVAVKRIDAEERGEREFKSEVAAIASVHHVNLVRLFGYCNSSSAPRYLVYDFISNGSLDCWIFPKRDSQRRPRRSGCLSWNLRYKVAVDVAKGLAYLHHDCRSRILHLDIKPENILLDESFRALVSDFGLSKLTPKDESQAMSTIRGTRGYMAPEWLLEKGISDKTDVYSYGMVLLEIVGGRKNVCLVEDEKYKSKRKWQYFPKIVNEKVKQGKIMEIVDDRLMEYGGGVDENEVMKLVYVALWCVQEKPRLRPSMAKVVDMLEGRVMVDQPPSTKMILVDFLCDDNDDDDDDVTDSNINISKMDSVMSIQSNVECNSSTYSYSTTVFSGR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0614 456 Pfam Protein kinase domain 106 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0614 456 PANTHER RECEPTOR-LIKE KINASE 1 456 - -
Psa1g0614 456 SUPERFAMILY Protein kinase-like (PK-like) 84 389 IPR011009 -
Psa1g0614 456 ProSiteProfiles Protein kinase domain profile. 102 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0614 456 Gene3D Phosphorylase Kinase; domain 1 63 177 - -
Psa1g0614 456 SMART serkin_6 102 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0614 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Psa1g0614 456 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 456 - -
Psa1g0614 456 ProSitePatterns Protein kinases ATP-binding region signature. 108 130 IPR017441 GO:0005524
Psa1g0614 456 Gene3D Transferase(Phosphotransferase) domain 1 178 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0614 Psa-Chr1 38188521 38190565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0614 1 400 Receptor kinase-like Gene Family AT5G20050 62.283 4.05e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa1g0614 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0614 - - gmx:100791152 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0614 1 38188521 38190565 Psa1g0614 1 38188521 38190565 ECH