Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0612 ATGGGAACCTCTGAAAACGCCGCCGGTGGGGGCCGAGGCACCGCCGTCCCCAAAGAGGTTGACTATGCGAATTACTTCTGCACCTACTCCTTCCTCTACCACCAAAAAGAGATGCTCTCCGATCGTGTTCGCATGGACGCTTACTTCAATGCCGTTTTTGAAAACAAACACCACTTTAAGGACAAGGTTGTTTTGGATGTTGGAGCTGGAAGTGGTATTCTTGCTATATGGTCAGCACAGGCTGGTGCAAAGAAGGTGTATGCAGTGGAAGCTACTAAGATGTCCGAACACGCTCGGGCACTTGTCAAAGCAAATAGTCTTGAAAATGTAGTTGAAGTCATTGAGGGCTCCATGGAGGATATTACCTTGCCGGAGAAAGTTGATGTTATCATTTCTGAATGGATGGGTTATTTTCTTCTGCGAGAGTCTATGTTTGATTCTGTTATATGTGCTCGTGACCGCTGGCTCAAACCAACGGGGGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCGCCTATCAGGACTGGAATAGTAGAACAAAAATTGGATGATTACCAATCAGCTATGGGTGATTGGCACAGCTTTGTCGATGAAACAAAAGCCTGCTATGGTGTTGATATGAGCACCTTGGCAAAGCCTTTTGCAGAGGAGCAGAGGAAATACTATCTACAGACATCATTGTGGAGCAATCTTCATCCACATCAAGTTATAGGAACTGCTGGTATAGTAAAGGAAATTGACTGTTTGACTGCCACAGTGGCGGACATAGAGGAAGTCAGGTCAAAATTTTCTCTATCAATAACCATGGACAATACAAAAGTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTCCGGGGACGAAGCGAGGATCCAGCTGAACATGAGATTGAATTATCTACCGCTCCTAGTGTAGATTACTGTACACACTGGGGCCAGCAGGTTTTCCTTTTAAATCCTCCTACACATGTGAGTCAAGGTGACGAGTTGAGTGTTAATTTTCTCATGAGTCGTTCAAAGGAAAACCATCGTTTGATGGAGGTTGAGGTTGGGTGTGAGATTCAAAAGCATTCTGGCAAGCTTGTTGCACCTTTCAAAAATAAGTACTACATTGAATGA 1122 0.4474 MGTSENAAGGGRGTAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANSLENVVEVIEGSMEDITLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIVEQKLDDYQSAMGDWHSFVDETKACYGVDMSTLAKPFAEEQRKYYLQTSLWSNLHPHQVIGTAGIVKEIDCLTATVADIEEVRSKFSLSITMDNTKVCGFGGWFDVHFRGRSEDPAEHEIELSTAPSVDYCTHWGQQVFLLNPPTHVSQGDELSVNFLMSRSKENHRLMEVEVGCEIQKHSGKLVAPFKNKYYIE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0612 373 Gene3D - 166 373 - -
Psa1g0612 373 CDD AdoMet_MTases 64 163 - -
Psa1g0612 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 10 360 - -
Psa1g0612 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Psa1g0612 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 360 IPR025799 GO:0016274|GO:0018216
Psa1g0612 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Psa1g0612 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Psa1g0612 373 Gene3D Vaccinia Virus protein VP39 19 164 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0612 Psa-Chr1 37925620 37930223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0612 24 334 C2H2 Transcription Factor Family AT3G12270 34.234 4.39e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0612 K11434 - gmx:100790625 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0612 1 37925620 37930223 Psa1g0612 1 37925620 37930223 ECH