Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0593 ATGCAATTTGATGATCAAAACAGAGTGGAAAAAGCTAAAAGGCGCGCACTGGTAAATCAAACTGAAGCAAGAAACAGAGTTGAATTATTTCGGCATTTGCCTCAGTATGAACATGAGGCTCAGGTTCCTAATCTTGAGTCAAAGCTTTTCCAACTTGACTCCGTGCATCCTGCTGTGTTCAAGGTTGGATTACGTTATATGGCCGGAGATATATCAGGGGTTAATGCTCGTTGTATTGAAATGCTTAAAGCATTTCAGGAAGCTATTATAGACTACTCGACTCCACCTGAAAAAGTACTTATTAGAGATTTAACTGCAAAAATCAGTAGTTATATTTCATTTATTAGTGAATGCAGACCACTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTGAAGAGTCGAATTGCCAGGTTGCCCATAAGTCATACTGATGCTGAGGCAAAAGCAACACTTTGTTCTGATATTGACCGATTCATTTATGAAAAAATAATTGTTGCGGAAAAGGTTATTATTGAACACGCCACCCCTAAAGTAAGGGATGGAGATGTTCTTCTTGCATTTGGACTGTCTTGTGTTGTTGAGATGATTCTCGTATCTGCCCACGATCTTGGGAAACAATTCCGAGTTGTGGTGGTAGACTCACGACCAAAGCTTGAAAGTCAGGCCTTACTTACTAGGCTTATGGCCAAGGGTCTGAGTTGTACGTATATTCATATAAATGCTGTTTCATATATTATGCACGAGGTCACAAAAGTTTTTCTGGGAGCTTCTGCTATTCTTTCTAATGGAAATGTACTTTCAAGGGTTGGGACAGCATGTATTGCAATGGTGGCTCATGAATTTCGTGTTCCTGTATTAATCTGTTGTGAAACTTTTAAGTTTCATGAAAGGGTGCTACTTGATTCAATATGTTGCAATGAAATAGGTGACCCTGGTGCTGTTGCCACGGTTCCTGGAAGAATGGATATCAATTATCTGGACAATTGGGAAAATGAAAAGAATTTGCAGCTTTTGAATTTAATGTATGATGTTACTCCTTCAGATTATGTCTCAGTTATTGTTACGGAGCATGGAATGATCCCTACTACAAGTGTGCCTGTGATCGTGCGTGAGTATGGACAAGAGCATTATTTGATATAG 1143 0.3902 MQFDDQNRVEKAKRRALVNQTEARNRVELFRHLPQYEHEAQVPNLESKLFQLDSVHPAVFKVGLRYMAGDISGVNARCIEMLKAFQEAIIDYSTPPEKVLIRDLTAKISSYISFISECRPLSISMGNAIRFVKSRIARLPISHTDAEAKATLCSDIDRFIYEKIIVAEKVIIEHATPKVRDGDVLLAFGLSCVVEMILVSAHDLGKQFRVVVVDSRPKLESQALLTRLMAKGLSCTYIHINAVSYIMHEVTKVFLGASAILSNGNVLSRVGTACIAMVAHEFRVPVLICCETFKFHERVLLDSICCNEIGDPGAVATVPGRMDINYLDNWENEKNLQLLNLMYDVTPSDYVSVIVTEHGMIPTTSVPVIVREYGQEHYLI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0593 380 Gene3D - 166 373 IPR042529 -
Psa1g0593 380 SUPERFAMILY NagB/RpiA/CoA transferase-like 65 373 IPR037171 -
Psa1g0593 380 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 380 - -
Psa1g0593 380 Pfam Initiation factor 2 subunit family 71 362 IPR000649 GO:0044237
Psa1g0593 380 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0593 Psa-Chr1 36921103 36927366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0593 1 380 Eukaryotic Initiation Factors Gene Family AT5G38640 71.316 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0593 K03680 - gmx:100778711 613.224