Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0584 ATGTTGATAACCGTAAGAGACCCTTCCCCTACTCTCCGCTGTTCTTCGCTTAACCGCCGTCTCATTCCAACAAAACACAACCTCTCTCCCCGTCTTCTCCGTTCATCTTTCCGTCAACACAACCTCTCTCTCCGTCTCCGTTCATCCTCCTCCTCCAATCTCTATACCAGTTGTGACCTAGCGAATTTCGATCCTCTAGGCATTAATCCAGATTTATCTTCATCTTCTACTTGGAGAAATCTCCTCACTATCTTTCAAACCTCTTCGCAAAAAGATAAACCTCGAGGCGTAGCAGCTGCAATTGAGGATAGTTCAATTGATTTTGGTGACTTCTTTAATGGTCCACTGCCTGGGAAGTTTCTCAAGCTTTTAGGGTTTCTTGCTTTGTCGAGGCTCGGTGTGTATATACCTCTGGGTGGAGTTAATAGGGACGCTTTTCTAGGAAATTTGGATCAGAACTCTTTGTTAACTACTTTGGATTCCTTTTCTGGTGGAGGTATTGGTAGACTTGGAATATGCTCTCTTGGCATTGTTCCGTTCATCAATGCGCAGATTGTTTTTCAGCTTCTTGCTCAAGTGTATCCCAAATTGCAAGATCTTCAGAAGAAAGAAGGTGAGGCGGGAAGAAAGAAGCTTCTTCAGTATACTCGATATGCTTCGGTTGGATTTGCTATTGTACAGGCTATCGGGCAAGTTCTTTTCCTACGGCCCTATGCAAATGATTTTACTACAGAGTGGGCGCTTACTTCTGTTATCTTACTAACACTTGGCTCTGTCTTTACTACATACATTGGGGAACAAATTACCGAACTCAAACTTGGGAATGGTACCTCTCTTTTGATATTCACAAACATTATCTCATACTTGCCGGCGTCTTTTGGTCGCACATTTTCACAGGCGTTTAGTGATGCTAACTATGTTGGACTTGTTACCATCATTGTCTCATTCTTTCTGTTGGTACTTGGTATTGTCTATGTTCAGGAAGCAGAGAGAAAAATTCCTATTAATTATGCTTCTAGATTCACCAGCAAAAGTGGAGGGATTGAAAAATCGGCTTACCTTCCGTTTAAGGTAAATAGTTCTGGGGTAATGCCTATCATTTTTTCTACATCATCATTAGCTCTTCCTGGTACTTTAGCACGCTTCACTGGTTTAAGCTCACTGAAAACTGCTGCAGTGGCTTTGAATCCAGGAGGCTCCTTCTATCTTCCATTTAACATACTTTTGATTGCCTTCTTCAACTACTATTATACTTTCCTACAACTGGATCCCGATGATGTGAGTGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTTGTCAGACCAGGCAAAAGTACAGCTACATTTATTAAAACAGTTCTTAGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCAATCTTGGCTGCTGGACCTGCAGTTGTTGAGCAGACCGCACACTTGACTGCATTCCGGGGGTTTGCTGGAACATCTATTCTTATTCTTGTTGGTTGTGCGACAGACACGGCCAGAAAAGTTCGAGCTGAGATTATATCCCAGAAGTACAAAAACATAGAGTTATATGATTTTGATAAGTATTGA 1584 0.4179 MLITVRDPSPTLRCSSLNRRLIPTKHNLSPRLLRSSFRQHNLSLRLRSSSSSNLYTSCDLANFDPLGINPDLSSSSTWRNLLTIFQTSSQKDKPRGVAAAIEDSSIDFGDFFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASVGFAIVQAIGQVLFLRPYANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTSLLIFTNIISYLPASFGRTFSQAFSDANYVGLVTIIVSFFLLVLGIVYVQEAERKIPINYASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFDKY* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0584 527 Gene3D SecY subunit domain 111 516 IPR023201 -
Psa1g0584 527 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 48 525 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 120 138 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 170 190 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 212 235 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 244 269 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 270 293 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 361 380 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 400 422 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 455 473 - -
Psa1g0584 527 PRINTS Preprotein translocase SecY subunit signature 489 507 - -
Psa1g0584 527 ProSitePatterns Protein secY signature 2. 263 280 IPR030659 -
Psa1g0584 527 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 48 525 IPR002208 GO:0015031|GO:0016020
Psa1g0584 527 SUPERFAMILY Preprotein translocase SecY subunit 113 510 IPR023201 -
Psa1g0584 527 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 119 516 IPR002208 GO:0015031|GO:0016020
Psa1g0584 527 Pfam SecY 172 503 IPR002208 GO:0015031|GO:0016020
Psa1g0584 527 ProSitePatterns Protein secY signature 1. 171 190 IPR030659 -
Psa1g0584 527 Hamap Protein translocase subunit SecY [secY]. 108 520 IPR026593 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0584 38 527 Chloroplast and Mitochondria Gene Families AT2G18710 80.040 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0584 K10956 - gmx:100810430 801.586