Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0567 ATGGCTCCTCCATGGGTTCAAGAACTGCATCTCAATTCCTTGACTATACCAGTCACCATCATCAACAAATTCTCCGTTACTCCCTCCAAGCCTATTCCTGTTAAACCCGGCGATAGTTTGTACCTTTCAAACCTCGATGACATGATCGGGGCGCGCGTTTTCACACCGACCGTGTATTTTTATCAATCGGACAACTCGACCGGGGCTTTCCAGAAACCTGCAGTCACAGAAATACTTCGCCGTTCGCTAGCAGATGTTTTGGTTCCTTATTACCCTCTCTCAGGAAGGTTGAGAGAAACAAAAAATGGTAAACTGGAAGTGTTCTTTGGACAAGAACTACAAGGAGCTTTAATGGTTGAAGCAAGAACTAACATAGCTTTATCCGAACTAGGTGATTTTGCAGCACCAAACCCTTGTTGGGAACCATTGATATTCAAATTTCCGAATGAAGAACAATACAAAGTGTTGGAAATGCCACTTGTTATAGCTCAGGTAACACTCTTCACATGTGGTGGATTTAGCATCGGTTTACGCCTTTGTCATTGTATCTGCGATGGAATGGGAGCTATGCAGTTTCTAGGAGCATGGGCTGCAACAGCGAAAACCGGAACGCTGGTGACAGAACCTGAACCGTGCTGGAATAGAGAAATTTTCAAACCACGCGATCCACCGGAAGTGAAGTTTCCACACATGGAGTTCATGAGAATTGATGAAAGATCAGATTTAACAATGAAGCTATGGAAAACAAAGCCGGTTCAAAAATGTTATAGAATCAACCGCGAGTTTCAGAACCAATTGAAATCACTTGCTCAACCATTTGATGATGCTGGTTGCACCACATTTGATGCAATGGCTGCACATATTTGGAGATCATGGGTTAAAGCTCTTGATGTGAAGCCTTTAGATTACCAATTAAGGTTAACATTTTCTGTCAATGCTAGACAGAAGCTTAAGAATCCGCCATTGAAAGAAGGTTTTTATGGCAATGTGGTTTGTATTGCTTGCACAACAAGTAATGTTTCTGAGCTTGTGAATGGGAAATTACCAGATACAACCCTTTGGGTTCGCGAAGCTAGACAGAATGTAACAGAAGAATATTTGAGATCGACCGTTGATTATGTCGAAGTTGATAGGCCAAAGCAACTTGAGTTTGGTGGTAAGCTTACAATAACTCAATGGACAAGATTTTCGATATATAAATGTGCTGATTTTGGATGGGGTAAGCCAATTTATGCTGGTCCTATAGATTTAACACCTACACCTCAAGTTTGTGTGTTTTTACCTGAAGGGGAAGATGATTGTAGTAATGGTTCTATGATTGTTTGCATTTGCTTGCCTGAATCTGCTGCTAACAAGTTTACACAAGCCTTGATGGTTGATTCTCTCTTGACAAAGATCTTTTGA 1404 0.4131 MAPPWVQELHLNSLTIPVTIINKFSVTPSKPIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQSDNSTGAFQKPAVTEILRRSLADVLVPYYPLSGRLRETKNGKLEVFFGQELQGALMVEARTNIALSELGDFAAPNPCWEPLIFKFPNEEQYKVLEMPLVIAQVTLFTCGGFSIGLRLCHCICDGMGAMQFLGAWAATAKTGTLVTEPEPCWNREIFKPRDPPEVKFPHMEFMRIDERSDLTMKLWKTKPVQKCYRINREFQNQLKSLAQPFDDAGCTTFDAMAAHIWRSWVKALDVKPLDYQLRLTFSVNARQKLKNPPLKEGFYGNVVCIACTTSNVSELVNGKLPDTTLWVREARQNVTEEYLRSTVDYVEVDRPKQLEFGGKLTITQWTRFSIYKCADFGWGKPIYAGPIDLTPTPQVCVFLPEGEDDCSNGSMIVCICLPESAANKFTQALMVDSLLTKIF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0567 467 Gene3D - 15 235 IPR023213 -
Psa1g0567 467 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 459 - -
Psa1g0567 467 Pfam Transferase family 17 455 - -
Psa1g0567 467 Gene3D - 238 458 IPR023213 -
Psa1g0567 467 PANTHER F21B7.2 12 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0567 Psa-Chr1 34081435 34083389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0567 21 458 Monolignol Biosynthesis Gene Families AT5G48930 29.844 4.61e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0567 K15400 - gmx:100802814 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0567 1 34081435 34083389 Psa1g0567 1 34081435 34083389 ECH