Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0559 ATGTCGCTGCCGGAATGTTCAGCTACACAACTAGCGCAGCTCATCGGTCCCAACGCTACAAACGCCGTAGCCGCCGCTGATTTCATCTGCAGCCAGTTTACAGCGGTGGGAAAAAGGTTCGTTGACACACAATACGCGGTGGATAACACATATCTTCTATTCTCAGCTTATCTTGTTTTCTCTATGCAACTTGGTTTCGCTATGCTCTGTGCCGGTTCAGTTCGAGCCAAAAACACCATGAACATCATGCTTACAAACGTTCTAGACGCCGCCGCCGGTGGGCTGTTTTACTATCTCTTCGGTTTCGCCTTTGCCTTCGGTGGACCTTCAAACGGTTTCATCGGAAAACATTTCTTCGGCCTCAAAGACGTTCCGTCAGAAGCTTTTGATTACAGTTATTTTCTTTATCAGTGGGCTTTCGCCATAGCAGCCGCCGGCATCACCAGCGGCTCTATAGCAGAACGAACACAGTTTGTTGCTTATCTTATTTACTCCTCCTTTCTCACTGGCTTTGTTTACCCTGTTGTTTCTCATTGGTTTTGGTCTAGTGATGGTTGGGCTAGCGCAACCAACACAAATAACCTCTTGTTTAGCACCGGAGTCATCGATTTCGCTGGCTCCGGTGTTGTTCATATGGTTGGTGGTATTGCTGGTCTTTGGGGAGCGCTTATTGAAGGTCCGCGAATTGGAAGATTCGATCATAACGGTCGAGCTGTCACTCTTCGCGGACACAGCGCTTCTCTAGTTGTTCTGGGAACTTTCATGCTTTGGTTTGGTTGGTATGGTTTCAACCCTGGCTCCTTCACCAAGATTCTAAGCTCTTATGAGTCAGGTACTTATTATGGTCAATGGAGTGCGGTGGGTAGAACGGCGGTGACGACAACACTGGCAGGATGTACGGCGGCGTTGACTACACTTTTCGGGAAAAGAATTCTCTCCGGTCACTGGAACGTTACCGATGTGTGCAACGGACTATTAGGCGGATTCGCGGCAATAACCGCCGGGTGTTCCGTGGTTGAGCCATGGGCAGCGATAGTATGTGGATTTATCGCCGCGGTGGTTCTGATCTCGTGTAACGTACTCGCGGAAAAGGTGCGTTACGATGATCCATTAGAAGCAGCGCAGCTTCACGGAGGATGTGGCGCGTGGGGTATAATATTCACCGCTTTGTTTGCTAAAAAGGAGTATGTGAACCAGGTTTACCCGGGTAAACTGGACCGACCCTATGGGCTATTTATGGGTGGTGGAGGGAAGTTATTAGGGGCACACGTGATTCAAATTTTGGTTATTATTGGTTGGGTCAGTGCAACCATGGGTCCTCTTTTCTTTGCTTTGAATAAAATGAAGTTGTTAAGGATCTCAGCTGAAGATGAACTTGCGGGTATGGATCTGACCCGACATGGTGGTTTTGCTTATGAAGATGAGACACATAAACATGGGATTCATTTGAGGAAAATTGATCATAACTCTTCTTCTACTCCCACTCCCACTCCCACCACAGATTTGTGA 1509 0.4798 MSLPECSATQLAQLIGPNATNAVAAADFICSQFTAVGKRFVDTQYAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGKHFFGLKDVPSEAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSSDGWASATNTNNLLFSTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHNGRAVTLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSSYESGTYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFIAAVVLISCNVLAEKVRYDDPLEAAQLHGGCGAWGIIFTALFAKKEYVNQVYPGKLDRPYGLFMGGGGKLLGAHVIQILVIIGWVSATMGPLFFALNKMKLLRISAEDELAGMDLTRHGGFAYEDETHKHGIHLRKIDHNSSSTPTPTPTTDL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0559 502 MobiDBLite consensus disorder prediction 483 502 - -
Psa1g0559 502 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Psa1g0559 502 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Psa1g0559 502 SUPERFAMILY Ammonium transporter 45 453 - -
Psa1g0559 502 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Psa1g0559 502 Gene3D Ammonium transporter AmtB like domains 29 489 IPR029020 -
Psa1g0559 502 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 491 - -
Psa1g0559 502 MobiDBLite consensus disorder prediction 487 502 - -
Psa1g0559 502 PANTHER AMMONIUM TRANSPORTER 5 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0559 Psa-Chr1 33786851 33789323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0559 5 498 Inorganic Solute Cotransporters AT4G13510 80.119 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0559 K03320 - egt:105950262 815.839