Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0531 ATGGCTTCAGATGTTTCATTTGATGATCTGAAGAACGAGAATGTTGACCTCGAAAACATTCCGATAGATGAAGTTTTTCAGCAGCTAAAATGTACAAAAGAGGGCCTCTCATCCGAGGAAGGAGAGAAGAGGCTCCAAATATTTGGACCAAACAAGCTAGAGGAGAAAACAGAAAGCAAACTCCTCAAGTTTTTAGGTTTTATGTGGAATCCATTATCATGGGTTATGGAGGCAGCTGCTATCATGGCCATTGTATTGGCCAATGGAGGGGGAAAGCCACCGGATTGGCAAGATTTTACTGGTATTATGGTGTTGCTTATCATTAACTCAACCATTAGTTTCATTGAGGAAAACAATGCTGGAAATGCTGCTGCTGCTTTGATGGCTGGTCTTGCCCCCAAAACCAAGCTCTTGAGGGATGGAAAATGGAGTGAGCAAGAAGCTGAAATTTTGGTACCAGGAGATATCGTCAGTATCAAGTTGGGTGACATTGTTCCAGCCGATGCCCGTCTTTTGGAAGGAGATCCCTTAAAGATTGACCAATCTGCCCTCACTGGTGAGTCCTTGCCTGTAACAAGGAACCCTGGGGATGCGGTCTTCTCTGGTTCAACTTGCAAACAAGGTGAAATTGAGGCTATTGTCATTGCCACTGGTGTACACACCTTCTTTGGTAAAGCTGCACATCTTGTAGACAGCACTAACAATGTTGGTCACTTCCAAAAGGTGTTGACATCCATTGGTAATTTCTGTATCTGCTCAATTGCTGTGGGAATGTTGATTGAGATCATTGTGATGTACCCGATCCAGAATAGAACTTACAGAGATGGTATTGACAACTTGTTGGTGCTTCTCATTGGAGGTATCCCAATTGCCATGCCAACGGTTTTGTCTGTGACCATGGCTATTGGATCTCACCGCCTTTCTCAGCAGGGAGCTATCACCAAGAGAATGACAGCCATTGAAGAAATGGCAGGAATGGACGTTCTCTGCAGTGACAAGACTGGAACTCTCACTCTTAACAAGCTTAGCGTGGACAAGAACTTGATTGAGGTTTTTCCAGATAACATGGACAAGGACAGTGTTGTCCTATATGCTGCAAGAGCTTCAAGAGTTGAAAACCAGGATGCCATTGATGCGTCAATTGTGAATATGTTGAGCGATCCCAAGGAGGCGAGAGCGGGAATTACTGAGGTGCATTTCTTGCCCTTTAATCCTGTGGACAAGCGCACAGCTATTACCTTCATCGACCAACATGGTGATTGGCACAGAAGCAGCAAGGGTGCTCCTGAGCAAATTATTGAGCTCTGTGAACTTAGGGGAGATATTTTGAAAAAGGCACACAAAACCATCGATGAGTATGCCGAGCGCGGGCTTCGTTCCTTGGCTGTTGGTTTCCAGACTGTTTCAGAAAAGACCAAGGAGAGTGCAGGAGAACCATGGGTGTTCTTGGGTCTCTTACCCCTCTTTGACCCTCCAAGGCATGACAGTGCGGAGACTATTCGCCGTGCTCTTGACCTCGGTGTTAATGTTAAGATGATCACTGGTGATCAACTTGCCATTGGAATAGAAACCGGTCGCAGACTTGGAATGGGAACCAACATGTACCCTTCATCTTCCCTTCTTGGCCAATGCAAAGATGCAGCTATTGCATCAATTCCAATTGATGAGCTTATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCCTGAGCACAAGTACGAGATTGTCAAAAGGTTACAGGACAGGAAGCATATTTGTGGCATGACTGGAGATGGTGTAAACGACGCACCAGCATTGAAGAAGGCAGACATTGGTATTGCAGTCGCTGATGCAACTGATGCCGCAAGAAGTGCCTCAGACATTGTCTTGACCGAGCCAGGATTGAGTGTGATTGTGAGTGCTGTGTTGACAAGTAGGGCCATCTTCCAAAGGATGAAGAACTACACAATCTATGCAGTTTCCATCACAATCCGTATCGTTCTCGGGTTCTTGCTCGTTGCTCTAATATGGAAGTTTGACTTCTCTCCTTTCATGGTTTTGATCATCGCCATTTTGAATGACGGAACCATCATGACCATCTCCAAGGACAGGGTGAAGCCATCTCCTGTTCCTGACTCATGGAAGCTCAAGGAAATCTTCGCCACCGGAGTCGTTCTTGGAACATATATGGCCATCATGACTGCAATTTTCTTCTTTCTTATTTATGAAACCAATTTCTTCTCGGAAATTTTTGGTGTCCGCCCAATTGCAGACAGCGTAGAACATCTCAACTCGGCTCTCTACCTCCAAGTGAGTATCATTAGTCAGGCACTTATCTTTGTTACCAGGTCAAGGAGCTGGTCATTTGTCGAGCGTCCTGGTTTGATGCTTCTTGGAGCCTTCATTGCCGCACAATTGGTTGCAACTGTCATTGCTGTGTATGCACACTGGGACTTTGCTAGAATCAATGGAGTTGGGTGGGAATGGGCTGGAGTTATCTGGATCTACAGCATTATTACATACATTCCTCTTGACATCCTCAAGTTTCTTATCCGCATGGGACTCACAGGCAGTGCCTGGGACAACATGATCCAAAACAGGACTGCGTTCACAACAAAGAAGGACTACGGGAAAGGTGAGAGGGAGGGTCAATGGGCTGCGGCTCAACGCACAATGCACGGTCTTGAATCCCATGAGGCCCCGAAGAACAGTCACGGCCATGAGCACTCTGAACTTGCTGAACAAGCCAGGAGACGTGCTGAGAATGCCAGGATGAGAGAGCTTCACACACTCAAGGGACATGTTGAATCAGTAGTCAAGTCGAAGGGTCTCGACGTTGACACCATGCAACAAAACTACACAGTCTAA 2847 0.4615 MASDVSFDDLKNENVDLENIPIDEVFQQLKCTKEGLSSEEGEKRLQIFGPNKLEEKTESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFTGIMVLLIINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEQEAEILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRNPGDAVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIGNFCICSIAVGMLIEIIVMYPIQNRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFPDNMDKDSVVLYAARASRVENQDAIDASIVNMLSDPKEARAGITEVHFLPFNPVDKRTAITFIDQHGDWHRSSKGAPEQIIELCELRGDILKKAHKTIDEYAERGLRSLAVGFQTVSEKTKESAGEPWVFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGIETGRRLGMGTNMYPSSSLLGQCKDAAIASIPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGVVLGTYMAIMTAIFFFLIYETNFFSEIFGVRPIADSVEHLNSALYLQVSIISQALIFVTRSRSWSFVERPGLMLLGAFIAAQLVATVIAVYAHWDFARINGVGWEWAGVIWIYSIITYIPLDILKFLIRMGLTGSAWDNMIQNRTAFTTKKDYGKGEREGQWAAAQRTMHGLESHEAPKNSHGHEHSELAEQARRRAENARMRELHTLKGHVESVVKSKGLDVDTMQQNYTV* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0531 948 Gene3D - 133 217 - -
Psa1g0531 948 MobiDBLite consensus disorder prediction 888 914 - -
Psa1g0531 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
Psa1g0531 948 Gene3D - 327 626 IPR023214 -
Psa1g0531 948 Gene3D - 95 816 - -
Psa1g0531 948 CDD P-type_ATPase_H 35 842 IPR006534 GO:0008553|GO:0016021|GO:0120029
Psa1g0531 948 PANTHER PLASMA MEMBRANE ATPASE 5 928 - -
Psa1g0531 948 SFLD p-type atpase 312 641 IPR044492 -
Psa1g0531 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 564 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0531 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 102 537 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0531 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 846 IPR023298 -
Psa1g0531 948 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Psa1g0531 948 Pfam E1-E2 ATPase 132 309 - -
Psa1g0531 948 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Psa1g0531 948 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Psa1g0531 948 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Psa1g0531 948 PRINTS P-type cation-transporting ATPase superfamily signature 484 495 - -
Psa1g0531 948 PRINTS P-type cation-transporting ATPase superfamily signature 506 516 - -
Psa1g0531 948 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Psa1g0531 948 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Psa1g0531 948 Pfam haloacid dehalogenase-like hydrolase 326 603 - -
Psa1g0531 948 PRINTS H+-transporting ATPase (proton pump) signature 446 464 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0531 948 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0531 948 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0531 948 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0531 948 PRINTS H+-transporting ATPase (proton pump) signature 761 782 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa1g0531 948 SUPERFAMILY HAD-like 326 636 IPR036412 -
Psa1g0531 948 Gene3D - 899 948 - -
Psa1g0531 948 MobiDBLite consensus disorder prediction 874 914 - -
Psa1g0531 948 PANTHER CALCIUM-TRANSPORTING ATPASE 5 928 - -
Psa1g0531 948 SUPERFAMILY Calcium ATPase, transduction domain A 133 230 IPR008250 -
Psa1g0531 948 Gene3D - 342 489 IPR023299 GO:0000166
Psa1g0531 948 SFLD Haloacid Dehalogenase 312 641 - -
Psa1g0531 948 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 35 807 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0531 Psa-Chr1 32269605 32275115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0531 1 948 Primary Pumps ATPases AT3G42640 85.021 0.0 1639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0531 K01535 - gmx:100798717 1615.9