Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0516 ATGGAAAGTTCTAAGAACAATAAATTGGAGAAAAGAAGTTATGATGTAGTTAATGAGGACCAACTTCATCTTGCTCATTCAAAGAAGCCAAAACTACCTGGTTTAGCCAGTGTGATTGTAGAAGCTTTGAAGGTGGATAGTTTGCAAAGACTATGCTCATCTTTGGAACCTCTACTCAGAAAAATTGTCAGTGAGGAAGTGGAGCGTGCTTTGGCGAAATTGGATCATGATAAACTGGGTGATAGGTCTTCGCCGCCGGGGGAAAAGAATCTGCAGCTTCATTTCAGAACAAGAATGCCACCTCATTTGTTCACAGGAGGGAAGGTTGAGGGAGAGCAAGGAGCAGTCATCCATGTTATCTTGTTGGATCCGAACACGGGCAACGTTGTTCAAGTTGGACCGGAATCAGTTTCTAAGTTGAATGTTGTTGTACTTGAAGGTGATTTTAATGAGGAGGTTGATGATGATTGGACAAAGGATCACTTTGAAAGCCATCAAGTAAAGGAACGGGACGGGAAGAGACCAATTCTAACCGGTGATTTGCAAGTTAGTCTAAAGGAAGGTGTAGGAACATTAGGCGAACTTTCTTTCACGGACAATTCTAGCTGGATTAGAAGCAGAAAATTTAGGCTTGGTGTTAAGGTGGCTCCTGGGTATTGTGATGAGATTCGGGTGCGCGAGGGTAAGACCGAAGCCTTTGCTGTTAAAGATCATAGAGGAGAATTGTACAAGAAACACTATCCACCTGCTTTGCACGATGAAGTTTGGAGATTGGATCGGATAGCAAAGGACGGTGCACTTCATAAAAAATTGATTCAATCAAGAATAGTAACTGTAGAAGATTTCCTGCGTCTTCTTGTTCGTGAGCCGCAGAAACTAAGAAGTATACTTGGTAGTGGGATGTCGAACAGAATGTGGGAGAACACTGTGGAGCATGCGAAGACATGTGTTTTGGGTACTAAGCTTTTTGTTTACTACACTGATGAAACCAATAGCACTGGCATTATGTTCAACAACATATATGAGCTAAGAGGCCTCATTGCAGATGGTCACTTCTTCTCTTTAGAATCTCTCACTCCAAATCAGAAGATGTCTGTGGATTCCTTGGTGAAAAAAGCATATGATAATTGGGACCAAGTGATAGAATATGATGGAAAAGTTTTAAATTCTTTGACTAATTCCAAAAGGGGATCAAAATCCGCTGACACTCATAAAATGCATCACAACAATTTCCAAGACCAGCAGTATGCATCTGCAAAGGGCAGGTCGTTGTACGTCTCGTCTGTACCGAATCAACATTTGCAAATAACGAACAACTACTTATCCAGTCCTGATTATCAGATGGTAGGGACATCTGTAAACGATTCACAAATAGCATTACCAGGAGCCATGAATTACAACATGACAGGTCCTGAAAACGGAGGCACTTATTATCATGGAGACTGGTCTAGGCAGAGAAATGGACAAGGGTTGGAAGACATAGTCGCGGAAGAGCTTCGTCTTAGGAGTTCACAGATGTTGGAGAGTGATGATATGCAGAGGTTACTTAAGACAATTAATGAAGGAGCTGATTTTGGTCATTCTAATGAGAGTTGTTACAGTTACAGGCTTGAGTATGAGCCTCCGTTCAGCGGCGAGGATAATGTCAAGTGCTCAGGGAAGGCTGTTGTTGGGTGGCTTAAGCTCAAAGCAGCTTTAAGGTGGGGAATATTTATTAGAAAAAAAGCCGCGGAAAGACGAGCACAGCTTACTGAGTTGAACTGA 1764 0.4218 MESSKNNKLEKRSYDVVNEDQLHLAHSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLDHDKLGDRSSPPGEKNLQLHFRTRMPPHLFTGGKVEGEQGAVIHVILLDPNTGNVVQVGPESVSKLNVVVLEGDFNEEVDDDWTKDHFESHQVKERDGKRPILTGDLQVSLKEGVGTLGELSFTDNSSWIRSRKFRLGVKVAPGYCDEIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQSRIVTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGTKLFVYYTDETNSTGIMFNNIYELRGLIADGHFFSLESLTPNQKMSVDSLVKKAYDNWDQVIEYDGKVLNSLTNSKRGSKSADTHKMHHNNFQDQQYASAKGRSLYVSSVPNQHLQITNNYLSSPDYQMVGTSVNDSQIALPGAMNYNMTGPENGGTYYHGDWSRQRNGQGLEDIVAEELRLRSSQMLESDDMQRLLKTINEGADFGHSNESCYSYRLEYEPPFSGEDNVKCSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0516 587 Pfam Calmodulin binding protein C-terminal domain 321 383 IPR046829 -
Psa1g0516 587 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
Psa1g0516 587 PANTHER OS02G0562300 PROTEIN 10 410 - -
Psa1g0516 587 PANTHER OS02G0562300 PROTEIN 481 586 - -
Psa1g0516 587 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
Psa1g0516 587 PANTHER OS02G0177800 PROTEIN 10 410 IPR012416 GO:0005516
Psa1g0516 587 PANTHER OS02G0177800 PROTEIN 481 586 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0516 Psa-Chr1 31774309 31777620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0516 1 587 Calmodulin-binding Proteins AT2G24300 61.066 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0516 - - gmx:100775528 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0516 1 31774309 31777620 Psa1g0516 1 31774309 31777620 ECH