Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0455 ATGGGAGATAGTGACATTGAAGGCGGCGGCGGTGGAGATGACGGTTTTCGTTCTCCGATCGGCCGTAAGTATCGTCCCGTGTTGGCTAACGATCGTGCTGTACTTGAGATGTCTTCTATAGATCCAGGATCTTCTTCTTCCTCAGCCTTTCCAGATCAACCTCATAATCTCAGAAAAATAAATGTAAGTTCAGATGCTAAAGATGGGAACTCTCCTCGGCAACCTCAACCTAATGGACCCCAGCAGGAATCTAAACTGGAGCTGTTTGGATTTGATTCTCTTGTCAATATTCTTGGTCTCAAAAGCATGACTGGTGAGCAATCTGCACCGCCGTCTAGTCCTAGAGATGGTGAGGATATTACAGTTGCTGCTGGGCTGCCAAAGCCTGAAGCTCTCAAACTAGGGACAATGATGGGTGTATTCATTCCTTGTGTTCAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGGTTCTTGTTGCTTTGTGTGGCACTTGTACGTTCCTTACTTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGCGCCCTTGGTCCAGAAGTTGGAGTTAGTATTGGTTTATGCTTTTTCCTTGGAAATGCAGTTGCTGGAGCTCTGTATGTATTGGGAGCTGTAGAAACATTTTTGAAAGCAATTCCTTCTGCTGGAATTTTTAGAGAGCCTATGACACAAGTTAATGGTACCACACTTGCGGTACAGAGTCCAAGTTCACATGACCTGCAAATTTATGGGATAGTTGTGACGATTGTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCATTTCTTATACCTGTTTTATTCTCACTCGTCTGCATATATGTGGGAATTCTGTTGGCAAAGGTGGATCATCCCACAGAGGGAATTACTGGGTTGAGTTTGGATACTATTAAAGAAAATTGGAGTTCAGATTATCAAAAGACTAATGATGCTGGAATTCCAGATCCCAATGGTTCTGTAACCTGGAATTTCAATTCTTTGGTGGGCCTCTTTTTCCCAGCAGTGACAGGAATAATGGCAGGTTCTAACCGATCATCTTCTCTGAGAGATACTCAACGATCTATTCCTGTTGGAACTTTATCTGCAACTCTTGTAACTTCTTGTATGTATCTTATTTCTGTGATAATGTTTGGCGCCATTGCCACCAGAGAGAAGCTTTTAACTGACAGGTTGCTTTCAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGGATTATTCTTTCAACCATGGGTGCTGCTCTTCAGAGCCTGACCGGCGCCCCACGTCTGCTTGCAGCTATTGCCAATGATGATATTTTACCTATTCTAAACTACTTTAAAGTTGCAGATGGTAGCGAGCCACATGTTGCTACCCTTTTTACTGCTTTCCTATGTATTGGGTGTGTCATCATTGGGAATCTGGATCTTATCACTCCAACTGTGACCATGTTTTTCCTTCTGTGTTATTCGGGTGTTAACTTGTCCTGCTTCCTTCTCGATCTACTAGATGCTCCTAGTTGGCGTCCTCGGTGGAAATTTCATCATTGGAGTTTGTCACTTCTAGGAGCATTACTTTGTGTAGTGATCATGTTCCTAATCTCTTGGTCATTCACTGTGGTTTCTTTGGCCCTTGCAAGTCTTATATATAAGTACGTGAGCATCAAAGGAAAGGCTGGAGACTGGGGAGACGGTTTCAAAAGCGCTTATTTCCAACTTGCACTTCGTAGCCTTCGGTCTCTAGGAGCAAATCAAGTGCACCCAAAGAATTGGTATCCAATTCCGCTAGTGTTTTGTCGGCCTTGGGGAAAACTGCCCGAAAATGTTCCCTGTCATCCCAAACTTGCTGACTTCGCTAACTGTATGAAGAAAAAAGGTCGAGGAATGACTATATTTGTCTCCATACTAGACGGGGATTACCATGAATGTGCGGAAGATGCCAAGACAGCTTGTAAACAACTTAGTACCTACATTGAGTACAAGAATTGTGAAGGTGTGGCCGAGATTGTTGTAGCTCCTAACATGTCTGTAGGTTTTCGAGGCATCGTTCAGACAATGGGCCTTGGAAACCTCAAGCCGAAACATCGTGGTGAATGCGCTTATCCAGAAATCTGGCGCAGGCGTCTCGAGAATGGCCCAAATGTGTACCAGAAGCAATCGGTACAATTGACTGAGTATTGGATTGTAGAGATGGTATGTCCTCATGCTACCTTCGGTCTCTTCAATTGCTTCTTACCAAGGCGGAGAGCTTTTGAGAGTTGTAAGATTCAGGTTTTCTGTATTGCAGAAGAGGAAGCAGATGCAGAGGGGCTGAAAGCTGATGTTAAAAAATTCCTTTACGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACAATGAAATGGGATGTACAAGTGGATAGTGGAACTCCGCAAGATGAATCATTAGATGCATTTACCAGTGCTAATCAAAGAATTGTTGATTATTTAACCGAGATGAAGGCAAGAGCAGAGAGAGAAGGTACTTCCCTAATGGCAGATGGCAAGCCCGTGGTTGTGAACGAGAAGCAAGTTGAGAAGTTTTTATACACAACGCTTAAGCTCAATTCCATAATTTTGAGATACTCAAGAATGGCTGCTGTTGTGTTAGTAAGTCTTCCTCCCCCACCATTGAGCCACCCAGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATATACCAAGGATTTTGATTGTGAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 2865 0.4321 MGDSDIEGGGGGDDGFRSPIGRKYRPVLANDRAVLEMSSIDPGSSSSSAFPDQPHNLRKINVSSDAKDGNSPRQPQPNGPQQESKLELFGFDSLVNILGLKSMTGEQSAPPSSPRDGEDITVAAGLPKPEALKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLVLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAIPSAGIFREPMTQVNGTTLAVQSPSSHDLQIYGIVVTIVLCFIVFGGVKMINRVAPAFLIPVLFSLVCIYVGILLAKVDHPTEGITGLSLDTIKENWSSDYQKTNDAGIPDPNGSVTWNFNSLVGLFFPAVTGIMAGSNRSSSLRDTQRSIPVGTLSATLVTSCMYLISVIMFGAIATREKLLTDRLLSATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYHECAEDAKTACKQLSTYIEYKNCEGVAEIVVAPNMSVGFRGIVQTMGLGNLKPKHRGECAYPEIWRRRLENGPNVYQKQSVQLTEYWIVEMVCPHATFGLFNCFLPRRRAFESCKIQVFCIAEEEADAEGLKADVKKFLYDLRMQAEVFVITMKWDVQVDSGTPQDESLDAFTSANQRIVDYLTEMKARAEREGTSLMADGKPVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLSHPAYFYMEYMDLLLENIPRILIVRGYRRDVVTLFT* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0455 954 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 743 953 IPR004842 GO:0006811|GO:0015377|GO:0016021
Psa1g0455 954 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 15 742 IPR004842 GO:0006811|GO:0015377|GO:0016021
Psa1g0455 954 MobiDBLite consensus disorder prediction 1 25 - -
Psa1g0455 954 MobiDBLite consensus disorder prediction 38 82 - -
Psa1g0455 954 Pfam Amino acid permease 139 613 IPR004841 GO:0016020|GO:0055085
Psa1g0455 954 Gene3D Amino acid/polyamine transporter I 132 595 - -
Psa1g0455 954 Pfam Solute carrier family 12 779 953 IPR018491 GO:0006811|GO:0016020|GO:0022857
Psa1g0455 954 MobiDBLite consensus disorder prediction 39 82 - -
Psa1g0455 954 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 743 953 - -
Psa1g0455 954 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 15 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0455 Psa-Chr1 27801343 27822186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0455 134 954 Inorganic Solute Cotransporters AT1G30450 75.967 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0455 K14427 - gmx:100795205 1570.06