Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0449 GAGTCCTATAGTTCAGAAGATTTCTGGTGATTCGTTATCAATTAATGGCCGTACTTTCACCTTTGATTCTGTTGCTGATGTTGAAGCTACTCAGCTTGACATTTTTGAGCATGTTGGGGTTCCTTTGGGAGGATCGTTTGGCTGGTTTCAATTTTCTGTCTTTGCTTATGGACAGACGGGGAGTGGGAACGTATACTATGTGGGTCCTGCCAATTCTTTGGCTGAAGAAAATGTAGCAAAAGAGCAACAAGGACTTACACCGTGTTTTTGA 271 0.4244 SPIVQKISGDSLSINGRTFTFDSVADVEATQLDIFEHVGVPLGGSFGWFQFSVFAYGQTGSGNVYYVGPANSLAEENVAKEQQGLTPCF* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0449 89 Pfam Kinesin motor domain 14 87 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0449 89 ProSiteProfiles Kinesin motor domain profile. 1 89 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0449 89 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 68 IPR027417 -
Psa1g0449 89 Gene3D Kinesin motor domain 3 89 IPR036961 -
Psa1g0449 89 PANTHER KINESIN-LIKE PROTEIN KIN-12B 3 87 - -
Psa1g0449 89 PANTHER CENTROMERE PROTEIN E 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0449 Psa-Chr1 27432645 27433274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0449 21 67 Calmodulin-binding Proteins AT5G65930 38.298 5.96e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0449 K10400 - cit:102618774 112.849