Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0401 ATGTCTATGATCAAAGAAGATGAATGGTTTAAACAGGGTTATAGTCCTGCAAACCGAGACGACGAGGAAGATGATGTATACATCGGCGATGAAGCCTTTCCCATCCAAGAAGTGTCCAGTGAAGCAGACCTGGCTAGTCCAAAATCGCCGAAGCTTATCAATGCATTTCAGTTGATAGGGATGTCTTCGTGTTTAGACCTCTCTGGCTTTTTCGAGAAAGAGGATGTCTCGGAGAGAAAGATAAGGTTTACATCAAACCATTCACCCAAAGATTTGACGGAGAAGATTGAGGACATTGTAATAGAAATGGGTTTTAGTGTTCAGAAAAAAAATGGAAAATTGAAAGTTATACACGAGAATAAAGCACATAAAAGTCTAGGAAGCCTCTCGGTTGCGGCAGAGGTTTTTGAAATAGGTCCGTCATTGTATGTAGTCGAACTACGGAAATCTTATGGAGATGCAACCGTATATAGACAATTATGCAAGAAGTTATCAAATGACTTGGGTATAGCCAAGGCAGCACAGCTTGTGAGCTCGGAAATGATAAGCGTGTATGAAGAAAATAAGTTAGAAACCAGATAA 582 0.4021 MSMIKEDEWFKQGYSPANRDDEEDDVYIGDEAFPIQEVSSEADLASPKSPKLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSPKDLTEKIEDIVIEMGFSVQKKNGKLKVIHENKAHKSLGSLSVAAEVFEIGPSLYVVELRKSYGDATVYRQLCKKLSNDLGIAKAAQLVSSEMISVYEENKLETR* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0401 193 ProSiteProfiles NAF domain profile. 48 72 IPR018451 GO:0007165
Psa1g0401 193 CDD CIPK_C 54 165 - -
Psa1g0401 193 Pfam NAF domain 50 109 IPR004041 GO:0007165
Psa1g0401 193 MobiDBLite consensus disorder prediction 1 23 - -
Psa1g0401 193 Gene3D Kinase associated domain 1, KA1 48 170 - -
Psa1g0401 193 PANTHER - 2 180 - -
Psa1g0401 193 PANTHER CBL-INTERACTING PROTEIN KINASE 21 2 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0401 Psa-Chr1 25026716 25028192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0401 4 175 CBL-interacting serine-threonine protein kinases AT1G48260 56.395 1.01e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0401 K07198 - jre:108981583 263.462