Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0337 ATGGCAACCATGAAACACCGTCCTTCTCCTCTCGACGAACCACCCTCCGCCTCTTCCTCCTCCTCCGAGGATGATCGGAACTCTACTTCTCAAAAGCCAGAAGAAGAGGAAGATTCATCTGATGATGACTCTTCTTCCGAAGAAGAAGCAGAGGAAGTTCATGCTTCGACAAAACCTCCATCACCCACTCCAAGTTCAAACCCTAAATCTGCGTCCTCCGAATCAGAATCTGATTCCGAACCGAAACCGGAACAAGAACCAACACCACCTCCGAATACCAATGCCAAACCACTCGCTTCCAAACCGACGAAGGTTCAAACCTCTCCTTTACCTGCCAAATCAGGAACAAAGCGTGCCATGGAGAACACCAACACTGAAAATGACTCTAAGCGGTCGAAGAAGACCGCTGATAATGGTTCCCACGACGAGAAGGAAGTGGCGAAAGCCTCTAAGACTTCCTCTCACAGACTCTTCAGCGAAGAAGATGAACTCGCCATTCTGAAAGGTCTTGCTGATTTCATTTCCAAAACCGGAAAAGATCCAATGAATGACACACCAGCATTTTACTCTTTTGTGAAGAAATCTCTTCAAGCTGACGCCAACAAAGGACAACTGAGGCGGAAACTTCGCAGTCTGAAGAACAAGTATGAAAGCAATGGAGATTTTACCAAAGAGCATGATAAGAAAGCTTTTGAACTTTTCCAGAAGATCGGCTTCAAAAATGAAGCTAAAGAAAGTAATGAGAAAACACTGAAAAACTGCTCTGCTTCTGTTTCTGCTAAAGAAGTATTACTTTCTGAGAAGAAGAAGGAAACTGTGAAAGATGTTATTAAGAGTTTGTCTTTTGCTGAAATGGTTAGGTTTGGTGATGAATTGGGGTTGTCTTTGTTGAACATGAATGCAATGAAGAAGGGAATGGAACTGATGGGAGAATCAAAGATGGCTGTTTTTGAAGAGAGATGGAAAAAGGTTCAAATTGCTGAGATGGAATTGCTTATGCTTCGAGCAGAGTTGGTTAGAGATCAAACTAGCATGATATTGGAGGCATATAACAATTCTAACTAA 1065 0.4291 MATMKHRPSPLDEPPSASSSSSEDDRNSTSQKPEEEEDSSDDDSSSEEEAEEVHASTKPPSPTPSSNPKSASSESESDSEPKPEQEPTPPPNTNAKPLASKPTKVQTSPLPAKSGTKRAMENTNTENDSKRSKKTADNGSHDEKEVAKASKTSSHRLFSEEDELAILKGLADFISKTGKDPMNDTPAFYSFVKKSLQADANKGQLRRKLRSLKNKYESNGDFTKEHDKKAFELFQKIGFKNEAKESNEKTLKNCSASVSAKEVLLSEKKKETVKDVIKSLSFAEMVRFGDELGLSLLNMNAMKKGMELMGESKMAVFEERWKKVQIAEMELLMLRAELVRDQTSMILEAYNNSN* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0337 354 MobiDBLite consensus disorder prediction 123 159 - -
Psa1g0337 354 MobiDBLite consensus disorder prediction 97 122 - -
Psa1g0337 354 MobiDBLite consensus disorder prediction 35 49 - -
Psa1g0337 354 MobiDBLite consensus disorder prediction 1 159 - -
Psa1g0337 354 PANTHER STOREKEEPER PROTEIN 4 352 - -
Psa1g0337 354 PANTHER BNAANNG10740D PROTEIN-RELATED 4 352 IPR007592 GO:0006355
Psa1g0337 354 Pfam Protein of unknown function, DUF573 155 237 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0337 Psa-Chr1 18555603 18557129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0337 4 352 GeBP Transcription Factor Family AT1G61730 30.909 6.59e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Psa1g0337 DUF573 2.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0337 - - mtr:MTR_2g010790 245.358