Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0323 GGACGTCCAAAGGGTGTAACACCTAAGTACAGTTTGAAGCCCCTTGTACCAAGGTTGTCTGAACTTCTTGGATCCGAGTATTGTGAGGAGGTTGAGAAGTTGGTTGCACAAATTCCAGAAGGTGGTGTTTTGCTTTTAGAGAATGTGAGGTTCCACAAGGAAGAGGAGAAGAATGATCCTGAATTTGCCAAGAAGTTGGCTTCCCTTGCCGATCTTTATGTGAATGATGCATTTGGCACTGCCCATCGTGCTCATGCTTCTACAGAAGGTGTTGCTAAATACTTGAAGCCCTCTGTTGCAGGATTCCTCATGCAGAAGGAGCTTGATTATCTAGTTGGAGCTGTGTCAAACCCCAAGAAACCGTTTGCTGCCATTGTTGGTGGTTCTAAGGTGTCTTCCAAGATTGGAGTTATTGAATCCTTGTTGGAGAAGGTTGACATTCTCTTGCTTGGTGGAGGAATGGTGTTTACCTTTTACAAAGCTCAAGGTTATTCAGTTGGGACCTCTCTTGTGGAGGAAGACAAGCTTGGTCTTGCAACTTCACTTATTGAGAAAGCCAAGGCTAAAGGAGTTTCCCTTTTGCTTCCAACTGATGTGGTTATAGCTGACAAGTTTTCTGCTGATGCTAACGACAAGATTGTACCAGCATCAAGCATCCCTGATGGTTGGATGGGATTGGATATTGGACCTGATTCCATCAAAACATTTAACGAAGCATTGGACAAGAGTCAAACCGTAATTTGGAATGGACCAATGGGTGTTTTTGAGTTTGATAAGTTTGCCGCAGGAACAGAGGCCATAGCCAAGAAACTGGCAGAAATAAGTGGCAAAGGAGTAACAACCATCATTGGAGGAGGTGACTCTGTAGCCGCCGTGGAGAAGGCTGGACTAGCAGACAAGATGAGCCACATCTCTACCGGCGGAGGTGCGAGCTTAGAGCTTCTTGAGGGGAAGCCACTACCTGGAGTCCTTGCTCTTGATGATGCTTAA 990 0.4566 GRPKGVTPKYSLKPLVPRLSELLGSEYCEEVEKLVAQIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMVFTFYKAQGYSVGTSLVEEDKLGLATSLIEKAKAKGVSLLLPTDVVIADKFSADANDKIVPASSIPDGWMGLDIGPDSIKTFNEALDKSQTVIWNGPMGVFEFDKFAAGTEAIAKKLAEISGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDDA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0323 329 Pfam Phosphoglycerate kinase 1 318 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 Hamap Phosphoglycerate kinase [pgk]. 1 328 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PIRSF Pgk 1 329 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PRINTS Phosphoglycerate kinase family signature 41 56 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PRINTS Phosphoglycerate kinase family signature 69 91 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PRINTS Phosphoglycerate kinase family signature 100 122 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PRINTS Phosphoglycerate kinase family signature 123 142 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PRINTS Phosphoglycerate kinase family signature 245 270 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PRINTS Phosphoglycerate kinase family signature 281 292 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PRINTS Phosphoglycerate kinase family signature 304 321 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 PANTHER PHOSPHOGLYCERATE KINASE 1 329 IPR001576 GO:0004618|GO:0006096
Psa1g0323 329 Gene3D - 102 318 IPR015824 GO:0004618|GO:0006096
Psa1g0323 329 SUPERFAMILY Phosphoglycerate kinase 1 328 IPR036043 GO:0004618|GO:0006096
Psa1g0323 329 Gene3D - 1 326 IPR015824 GO:0004618|GO:0006096
Psa1g0323 329 PANTHER PHOSPHOGLYCERATE KINASE, CYTOSOLIC 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0323 Psa-Chr1 17693653 17695780 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0323 K00927 - gmx:100796458 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0323 1 17693653 17695780 Psa1g0323 1 17693653 17695780 ECH