Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0319 ATGGAACCTAGAAATGACTACCAGCCTGGATCACAGCCAGTAGTGCAGGACCATATGAATGAAATTTATCCGAGTAGAAGACCGTATGACCTCAATGCATCAGAAGTTAAACCTGTACATCATTTCTCGATACAGACGGGCGAGGAATTTGCCCTTGAATTTATGAGAGATAGGGCAAATCCCGGGAAGCCTGTGTTTTCGAATATCGGTGATCCGAATTATACCACAGGGTATATGGAACTGAAAGGAATTTTAGGCATCAGTCACGCAGGATCTGAAACTGGATCAGACATTTCTATGCTATCAATGATGGAGAAATATCCTAAAGAGTTTGATAGAACAAGCACGTCGTTTCTTGGAGACAGAAGCAACTATGGATCAATTCAATCGATACCAAGAACTTCACTGAATCAGGACAACAGGCAGTTTGTGCATGGATATGGCTCTTCTGAAAGTTACTATAACTCATCGACGATGATGAAGTTTCTTTGCAGCTTCGGCGGTCGAATATTGCCGCGACCATCTGATGGAAAGCTAAGGTATGTAGGAGGCCAAACACGGATTCTCCGTTTAAGAAAGGACATATCTTATCATGAGCTCATTCAGAAAGCATTGCTAATATATAACCAGGTTCATACAATTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATCCGACGAGGATTTACAGAATATGATGGAAGAATGTAATCATCTAGAAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCAATCAGTGATTTGGAGGATGCTCAGTTTGGTCTCACCTCCATGGGCGATGATTCTGAAATCCAGTATGTTATTGCTATCAATGGCATGGACTTGGAACCGAGAAAAAACTCAACTATGGCCGGTTTCAGCTATTCTGCAAATGATATAAATGAATTGGGTGGGCAAAATATTGACGGACAGAGCAATGCTCCCATGACGAGCAATTTCGACTCATCATTGCCTACTCATTTTTCTCAACCAAGGCTACCAACTTCCTCTAATTCATACGAAATGTATCCACTGTTTTACGCTGATCAAATGATGCACCATGGTGAACCGAATGGTCATGGCCAATATCTTATGCATCATGGCGTTGTTAATCCTTCTTATAAACCTTTTATTGAAGAGACTCCTATTAATATGATTCCTTATATGCCGAATATTCAACAAGGGGTTTTAAATGAAGTGCAAAATTCAGAAATACCAGAAACTTCGATGAGAATGACGGGTGATAATTCAATTCAACAAGAAACACTATTGTCGTCTCCTTCCCAACTGTTTGACGGTTACTCACAAAATGATTTTCTGGAAGCGTCAGTTGTAGTTACTGCGCCAGAGGGACATTCATTGCCTCCCAGAACGAACCAGATCCAGGATTACGACGAAGCTTCTTCTACTTCCGGCAGTGCATTTGGTGCTCCTTATGTTGATTCCCGATCCAATGCAGTTGACTTAAGTTGTCTTCACCCTCCTCCTCTTCCTAAAAGAGTTTATTATTCCGAAAGAGCTCCAAGGAAGCAAGTAGAGTCGCTGAATCGATCCTCAAAGTCTGATGATGCGCACAATTCTCAGTTCCACGTTTCAGATTTACTTTCTGGGGTCAACTCACAGGATTCAGCTATAGACTCTGGAAACAACTTGCATGACGGAAATCTGTCTAATCTAGCCGAGGAATTGAACATCACATCGAAGCCTTTGCATACAGATGGAAAAGGAACTGAAGATATCTTAAATAAGGACAATGCTGTTTCGTTGGAAACAGAAAATAGTTTTAACAATAACCATAAAAAATCCCCGCTTGAAGGTAAATCAGACATCTCTGCTCGGTATCATGATCCAGCGTCCAATCTTCCCGATGTTGATTGGGGTGACACCTCTGTGAAAGAATCAAACAATGATTTTAACAATCAAGCACTGCCTGTTCCTTTGAATGCAAACGCAACTGCAAAAGTTGATTCGCAGGCACAAGGTGACATTCTTATTGATATTAATGATAGATTCCCCCGCGAGTTGCTTAACGATATCTTCTCCAAAGCAATACTAGAAGAAGATTCCTCTAGTCAACATCCATTAGCTTCAGATGGAATCGGTTTAAGCATAAACATGGAGAATCACGAACCTAGAAGTTGGTCATATTTTCAAAAATTGGCGCAAGACGGGATTGATAACGATAACGCATCTCTTATTGACCAGGATCATCTTGGTTTTTCACCTGCAATAGTTGGAGATAATAGAGCTCAACATGTTACACCTTTAACAACTGATGAAGTTCCTCTAAACCGTGCAGAATTCCATCTAAATTTTGGCGAAGAAATTCAGAAAGACTTGCATGGAGAAAACGGAACCGAAACTACTGGTCTGAAAACTAATTATGATCAGTCCCAAATTAATGACACTGAAAGTATGCAATTCGATGCTATGTTGGACAACCTAAGAGAACAAGAGTCACACTATGAGGTTGGGAAGTTTGAAAAGAAAAATAGCAGTCTACCTCCTCCTCTTGATCCTTCTTTAGAAGAATTTGATACGAGTACATTGCAGGTCATAATGAATGAAGATCTTGAAGAGCTGAAGGAACTAGGATCTGGTACCTTCGGTACTGTTTATCATGGAAAATGGCGAGGAACAGATGTTGCCATTAAGAGAATAAAGAAAACCTGTTTTACCGGTCGGTCATCTGAGCAAGAGAGACTGACTCTTGAGTTTTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCATCCGAACGTGGTGGCATTTTATGGCGTGGTGCAGGATGGACCGGGAGGAACAATGGCAACTGTTACGGAGTATATGGTTGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCCAAAAATATTGTGCATTTCGACTTAAAATGCGACAATTTACTTGTAAACTTAAAAGATCCATTACGGCCAATATGCAAGGTTGGTGATTTTGGTTTGTCAAAAATTAAGCGAAATACCTTAGTTTCCGGTGGGGTGCGGGGAACTCTACCGTGGATGGCACCGGAGCTGCTGAATGGTAGCAGCAGCAAAGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTACTATGGGAGATTCTTACGGGCGAGGAACCGTACGCGAATATGCACTATGGTGCAATCATAGGTGGAATTGTTAACAACACACTAAGACCAACAATTCCAAATTACTGTGATCTTGAATGGCGAACACTAATGGAGCAATGTTGGGCACCAAATCCTGCAGCTAGGCCATCTTTCACAGAAATAGCGAGTCGGTTGCGTATTATGTCATCGGCAGCTAGCCAAACGAAATCACCAGGCCACAAAGCATCCAAATGA 3450 0.4139 MEPRNDYQPGSQPVVQDHMNEIYPSRRPYDLNASEVKPVHHFSIQTGEEFALEFMRDRANPGKPVFSNIGDPNYTTGYMELKGILGISHAGSETGSDISMLSMMEKYPKEFDRTSTSFLGDRSNYGSIQSIPRTSLNQDNRQFVHGYGSSESYYNSSTMMKFLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISYHELIQKALLIYNQVHTIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRMFLFSISDLEDAQFGLTSMGDDSEIQYVIAINGMDLEPRKNSTMAGFSYSANDINELGGQNIDGQSNAPMTSNFDSSLPTHFSQPRLPTSSNSYEMYPLFYADQMMHHGEPNGHGQYLMHHGVVNPSYKPFIEETPINMIPYMPNIQQGVLNEVQNSEIPETSMRMTGDNSIQQETLLSSPSQLFDGYSQNDFLEASVVVTAPEGHSLPPRTNQIQDYDEASSTSGSAFGAPYVDSRSNAVDLSCLHPPPLPKRVYYSERAPRKQVESLNRSSKSDDAHNSQFHVSDLLSGVNSQDSAIDSGNNLHDGNLSNLAEELNITSKPLHTDGKGTEDILNKDNAVSLETENSFNNNHKKSPLEGKSDISARYHDPASNLPDVDWGDTSVKESNNDFNNQALPVPLNANATAKVDSQAQGDILIDINDRFPRELLNDIFSKAILEEDSSSQHPLASDGIGLSINMENHEPRSWSYFQKLAQDGIDNDNASLIDQDHLGFSPAIVGDNRAQHVTPLTTDEVPLNRAEFHLNFGEEIQKDLHGENGTETTGLKTNYDQSQINDTESMQFDAMLDNLREQESHYEVGKFEKKNSSLPPPLDPSLEEFDTSTLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKTCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNYCDLEWRTLMEQCWAPNPAARPSFTEIASRLRIMSSAASQTKSPGHKASK* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0319 1149 MobiDBLite consensus disorder prediction 512 534 - -
Psa1g0319 1149 Gene3D Transferase(Phosphotransferase) domain 1 955 1148 - -
Psa1g0319 1149 SUPERFAMILY CAD & PB1 domains 175 263 - -
Psa1g0319 1149 SMART serkin_6 867 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0319 1149 Pfam PB1 domain 176 259 IPR000270 GO:0005515
Psa1g0319 1149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 992 1004 IPR008271 GO:0004672|GO:0006468
Psa1g0319 1149 SUPERFAMILY Protein kinase-like (PK-like) 849 1130 IPR011009 -
Psa1g0319 1149 MobiDBLite consensus disorder prediction 510 534 - -
Psa1g0319 1149 ProSiteProfiles Protein kinase domain profile. 867 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0319 1149 Gene3D Phosphorylase Kinase; domain 1 860 954 - -
Psa1g0319 1149 PANTHER SERINE-THREONINE PROTEIN KINASE 74 666 - -
Psa1g0319 1149 PANTHER SERINE-THREONINE PROTEIN KINASE 664 1149 - -
Psa1g0319 1149 Gene3D - 178 261 - -
Psa1g0319 1149 ProSitePatterns Protein kinases ATP-binding region signature. 873 898 IPR017441 GO:0005524
Psa1g0319 1149 Pfam Protein tyrosine and serine/threonine kinase 868 1130 IPR001245 GO:0004672|GO:0006468
Psa1g0319 1149 CDD STKc_MAP3K-like 873 1130 - -
Psa1g0319 1149 PRINTS Tyrosine kinase catalytic domain signature 949 962 IPR001245 GO:0004672|GO:0006468
Psa1g0319 1149 PRINTS Tyrosine kinase catalytic domain signature 986 1004 IPR001245 GO:0004672|GO:0006468
Psa1g0319 1149 PRINTS Tyrosine kinase catalytic domain signature 1057 1079 IPR001245 GO:0004672|GO:0006468
Psa1g0319 1149 PRINTS Tyrosine kinase catalytic domain signature 1101 1123 IPR001245 GO:0004672|GO:0006468
Psa1g0319 1149 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 664 1149 - -
Psa1g0319 1149 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 74 666 - -
Psa1g0319 1149 SMART PB1_new 174 261 IPR000270 GO:0005515
Psa1g0319 1149 CDD PB1_UP2 163 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0319 Psa-Chr1 17593948 17601267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0319 32 1149 MAP Kinase Kinase Kinase AT1G16270 48.475 0.0 966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Psa1g0319 PK_Tyr_Ser-Thr 1.9e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0319 - - gmx:100801946 1652.49