Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0316 ATGGCTTCTTCCCTTTTGACAAAGATTCTTTTAGCTCCTCGCTCGATTCACACTTCCTCCTTATTCACTCACTACCCACCAATTCTCTCTTCTTTTTTCAATAAGCAGCTGTTCTCTACACGAGCTGTTCCAACCACTAAGTTGACTGGTTGGGCTCCTTGTATGGCTTCTTCGATAGTTAGTAGAAGAGCTACATATTCGACACGATCTGCACATACAAATGAGCCGGTTGTTTCTGTAGATTGGCTTTATGAAAACTTGAAGGAGCCTGATATTAAGGTGGTGGATGCATCCTGGTACATGCCGGACGAGCAAAGGAATCCAATTCAAGAGTATCAGGTTGCTCATATTCCCGGGGCTCTTTTCTTTGACATAGATGGAATAGCAGACCGCACTACAAATTTGCCACACATGTTGCCTTCAGAGGAAGCTTTTGCCGCTGCTGTTTCTGCTCTTGGCATACAGAACAAAGATGACCTAGTCGTGTATGACGGAAAAGGACTATTTAGTGCAGCCCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGCCTGCCAAGGTGGCGCGCATCTGGTTATGATGTTGAATCTAGTGCTTCGAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCAATAGAGAAAGTATATCAGGGACAAGCAGTTGGTCCAATCACATTTGAGACTAAGTTTCAGCCACATCTTGTATGGACCCTTGAACAGGTAACGAAAAATATAGAGGAAAAATCTCACCAACAGGTAGACGCTCGATCAAAGCCCAGGTTTGATGGAATTGCACAAGAGCCCAGAAAGGGAATCAGAAGCGGTCATGTACCTGGCAGCAAATGCGTTCCTTTTCCCCAGATTTTAGATAGTTCACAAGCATTGTTACCAGCAGATGAGCTTAAGAAGCGATTTGAGCAAGAAGGCGTCTCTTTGGAAAAGCCGGTTGTGACTTCGTGTGGAACTGGAGTAACTGCATGCATTCTTGCATTGGGTCTTCATCGTCTTGGAAAGACCGATGTTGCGGTTTATGACGGATCATGGACTGAATGGGGATCACACCCCGATACTCCTGTTGACACCGCCGCAGCACAAACACAATAG 1134 0.4568 MASSLLTKILLAPRSIHTSSLFTHYPPILSSFFNKQLFSTRAVPTTKLTGWAPCMASSIVSRRATYSTRSAHTNEPVVSVDWLYENLKEPDIKVVDASWYMPDEQRNPIQEYQVAHIPGALFFDIDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPITFETKFQPHLVWTLEQVTKNIEEKSHQQVDARSKPRFDGIAQEPRKGIRSGHVPGSKCVPFPQILDSSQALLPADELKKRFEQEGVSLEKPVVTSCGTGVTACILALGLHRLGKTDVAVYDGSWTEWGSHPDTPVDTAAAQTQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0316 377 ProSitePatterns Rhodanese C-terminal signature. 351 361 IPR001307 GO:0004792
Psa1g0316 377 ProSiteProfiles Rhodanese domain profile. 256 370 IPR001763 -
Psa1g0316 377 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 249 371 IPR036873 -
Psa1g0316 377 Gene3D - 69 212 IPR036873 -
Psa1g0316 377 CDD TST_Repeat_2 247 363 - -
Psa1g0316 377 PANTHER THIOSULFATE SULFERTANSFERASE 69 372 IPR045078 GO:0016783
Psa1g0316 377 ProSiteProfiles Rhodanese domain profile. 88 205 IPR001763 -
Psa1g0316 377 Pfam Rhodanese-like domain 79 198 IPR001763 -
Psa1g0316 377 Pfam Rhodanese-like domain 248 363 IPR001763 -
Psa1g0316 377 Gene3D - 241 367 IPR036873 -
Psa1g0316 377 PANTHER BNAC02G25610D PROTEIN 69 372 - -
Psa1g0316 377 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 72 207 IPR036873 -
Psa1g0316 377 ProSitePatterns Rhodanese signature 1. 112 123 IPR001307 GO:0004792
Psa1g0316 377 SMART rhod_4 78 202 IPR001763 -
Psa1g0316 377 SMART rhod_4 246 367 IPR001763 -
Psa1g0316 377 CDD TST_Repeat_1 77 200 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0316 55 376 Sulfurtransferasese or Rhodanese AT1G79230 75.776 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0316 K01011 - gmx:100798053 649.432