Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0309 ATGAGGAGCTGTTTCTTCAACCCTTGGGTAGTGGTTTCCCTCGTTCTAGTTCTTCCCGTTCTTCTCTCTCTCAGAAACCCTCGAGGTGAACCAGAGAACACCATAACCCAAACAACCACTTCTTTTGGTAACGTGAAGCTGGCAAATACTTTTCCTTTTCAGTTCAATCAGAGGATCAGAGATGGTTCCAATCTTGAATATGATTTCTATAGAGATACTTGTCCTCAAGCTGAGGATATTGTTCGTTCTGCTGTTACTGATATCTACTTTGATCATAGAGATCTCTCGCCCTCTCTTCTTCGTCTTTTCTTTCATGATTGCTTCATTCAGGGGTGTGATGCTTCATTGCTATTGGAGGACAATGGTGGTGGAAACAGTTCCTCTGAGAAGCAAGCTATTCCAAATCAGACATTGAAAGGTTTTGACAAAATTGACATGATAAAGGAGGAAGCGGGTGGGCCTTTCTATCCAGTCTTAACAGGCAGGCGAGATAGCCATCAATCGTTTTTTGAGGATGCAACTGATCAAATTCCAAAGCCTGACGATAACATTACCCGCACGCTCCACCTCTTCAATCTTAGAGGATTCAGTGCACGGGAAACAGTCAGCCTTCTTGGAGGACACAACATTGGAAGAATCGGTTGTGATTTCATTCAGCAAAGGCTGTATGACTTTCAAGGAACAGGACAACCAGACCCGAGTATACCTCTCGATTTCCTCAGTCAGATGAGGCAAAACTGTCCAGACAACAAGAATATCAGCAGCAGCAGTACAGACAAGTTATCGACGACGTTTACAATTTCAAAGCCAACCAATGTTCATCACTCTAATAAAAAAGGGATGTCATACATGGAAGCATTGTCTGCAGTGTCATCTGGAGCATCATTTGACACTCACTACTACCAAAGCTTGTTGAGAGGAAGAGGGCTACTGTTTGCTGATCAGCAGCTGATGGCTGAGGAGAGGACTGCCAGATTGGTTTCTGCTTATGCTTCGGATGATGGATCGACCTTTCGGATGGATTTTGCCAGGGTTATGTTGAAATTGTCTAATCTTGATGTTTTGACTGGAAATCAAGGTCAGGTTCGTCTGAACTGCACCCAACACATAAGTTCTTAA 1119 0.4352 MRSCFFNPWVVVSLVLVLPVLLSLRNPRGEPENTITQTTTSFGNVKLANTFPFQFNQRIRDGSNLEYDFYRDTCPQAEDIVRSAVTDIYFDHRDLSPSLLRLFFHDCFIQGCDASLLLEDNGGGNSSSEKQAIPNQTLKGFDKIDMIKEEAGGPFYPVLTGRRDSHQSFFEDATDQIPKPDDNITRTLHLFNLRGFSARETVSLLGGHNIGRIGCDFIQQRLYDFQGTGQPDPSIPLDFLSQMRQNCPDNKNISSSSTDKLSTTFTISKPTNVHHSNKKGMSYMEALSAVSSGASFDTHYYQSLLRGRGLLFADQQLMAEERTARLVSAYASDDGSTFRMDFARVMLKLSNLDVLTGNQGQVRLNCTQHISS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0309 372 PRINTS Haem peroxidase superfamily signature 96 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Haem peroxidase superfamily signature 289 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 CDD secretory_peroxidase 64 366 IPR033905 GO:0004601|GO:0042744
Psa1g0309 372 Gene3D Peroxidase, domain 2 178 349 - -
Psa1g0309 372 PANTHER PEROXIDASE 151 368 - -
Psa1g0309 372 PANTHER PEROXIDASE 69 150 - -
Psa1g0309 372 SUPERFAMILY Heme-dependent peroxidases 65 368 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 Gene3D - 65 150 - -
Psa1g0309 372 PRINTS Plant peroxidase signature 74 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Plant peroxidase signature 98 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Plant peroxidase signature 139 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Plant peroxidase signature 287 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Plant peroxidase signature 303 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PRINTS Plant peroxidase signature 344 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 ProSiteProfiles Plant heme peroxidase family profile. 64 370 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 Pfam Peroxidase 149 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 Gene3D - 151 367 - -
Psa1g0309 372 PANTHER PEROXIDASE 25-RELATED 151 368 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 PANTHER PEROXIDASE 25-RELATED 69 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g0309 372 ProSitePatterns Peroxidases active site signature. 96 107 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0309 Psa-Chr1 17377756 17380006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0309 61 370 Peroxidase AT4G33870 41.329 4.61e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0309 K00430 - gmx:100804973 552.362