Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0291 ATGATCAAATATGCTACTGCTATCAGAAATTGTGATCCTGATGGTCCTCTCATGCTTTATGTGTCAAAGATGATTCCAGCATCTGATAAAGGAAGGTTTTTTGCCTTTGGCCGTGTCTTTGCTGTGTTCAGAGAACTGTCATTTGGATGGGAAAGAGGCAGGAGACTGTTGAAGATGTTCCTTGTGGTAACACAGTTGCTTGGTTGGTTTGGATCAATTTATCCCAAGAATGCTACTCTGACAAATGAGAAGGAAGTCGATGCAACACCTATTCGTGCTATGAAGTTTTCTGTCTCACCTGTTTGTGCGTGTTGCTGTTCAGTAGAGACTGTTCTTGAGAGGTCATGCCGCACAGTGATGAGCAAGTCTCCCAACAAGCACAACCGTTTGTTATGGAAGCAAGACCACTGGAAGATGGGCTGCAGAGCCATTGATGATGCAAATGGACCAAGGATGACCCCAAGATTCGTTCTAAAATCTTGTCCGAAGAGTATGGGTGGTGGTCAGGTCATTCCTACTGCTAGGAGAGTCATCTACGCGTCACAGCTGACAGCCAAACCAGGCTTCTTGAGCCTGTATACATGGTTGAAATCCAAGCTCCTGAGCAACTCTTGGTGGGCTGCAACATCTGGGCAGGCTTTCCCTCAGTGTGTGTTTGATCACTGGGACATGATGTCCTCGGATCCATTGGAGGCTGGTTCACAAGCTTCAGTACTTGTTACTGATATTCGTAAGAGGAAGGGTTTGAAGGAGCAGATGACACCACTCTCTGATTTTGAAGACAAGATTTAA 792 0.4571 MIKYATAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAVFRELSFGWERGRRLLKMFLVVTQLLGWFGSIYPKNATLTNEKEVDATPIRAMKFSVSPVCACCCSVETVLERSCRTVMSKSPNKHNRLLWKQDHWKMGCRAIDDANGPRMTPRFVLKSCPKSMGGGQVIPTARRVIYASQLTAKPGFLSLYTWLKSKLLSNSWWAATSGQAFPQCVFDHWDMMSSDPLEAGSQASVLVTDIRKRKGLKEQMTPLSDFEDKI* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0291 263 PANTHER - 200 262 - -
Psa1g0291 263 PANTHER - 4 41 - -
Psa1g0291 263 PANTHER - 108 155 - -
Psa1g0291 263 PANTHER - 74 104 - -
Psa1g0291 263 PANTHER - 163 190 - -
Psa1g0291 263 Gene3D Translation factors 2 42 - -
Psa1g0291 263 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 200 262 - -
Psa1g0291 263 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 163 190 - -
Psa1g0291 263 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 41 - -
Psa1g0291 263 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 74 104 - -
Psa1g0291 263 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 108 155 - -
Psa1g0291 263 Gene3D - 198 263 - -
Psa1g0291 263 SUPERFAMILY Translation proteins 5 40 IPR009000 -
Psa1g0291 263 SUPERFAMILY EF-G C-terminal domain-like 207 257 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0291 Psa-Chr1 15726648 15728082 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0291 157 263 Eukaryotic Initiation Factors Gene Family AT1G56070 52.318 4.20e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0291 K03234 - jre:108987171 138.272