Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0263 ATGATTCATTCAACTACGAAATCAGCAAAAGAGAAAGAAAACGATCGTGCCATCAGTTCGCACATCCTCACCCTCCATCGCCGTCTTCTCCACGCCTTAAACCTCGGAACTAGACATTTTGATGACAAGACGAATAGATGGAAGTGGCAGTGCGTCAATATTGAAGTGCAGAAAAATGTACTCCGTTCAACTACTGCGTTTCTTGATTCTGTAGCAGGTGATGCTCGTGCCATACGTCATACCATTGTTAAGGAATCTGCTGCTGATATTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAGTGAGCCCTTGTTAAGCATGGCATCGAATGTGGCTGTGAAGTTAGTTAGTGTTTTACCGAGTCAACAGTTGCAATTGCGATTGTTGGATCTTGTCTATTGTCTATCATCCTTGCTATCTTCGCATCAAGTAGAAGTTGCAATACCCTCTGCTACTGCTTTGAATTTGGTAATCTCAAATCTGAGTGCTACTAGTGAGAAGCCTGTTATTGAAGCACTGAAAGAAACAGAGATTTCCATTTGCATTGTTCAAAATATAAAAGACTGTGGTGCCAAGAAAATTGAATATTTTGTGGAGATGGCTTCACTTTTGAGCACAGTACTGTTGAGGTGGTCTTCATCTAGGTTTCCTGTTTGTAATGATGTTGAACTTATGAAAGTTTTAGCAAACATGCATACAAAGACAGATAGTTCCATTAAACTTGTTCTTCTAAAGCTGTACACATCTTTAGCTTTATGTGATTCCGTAGTGCAAAAACTCATTGAGGGTGGAAAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCAAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGATGGATTTGTGTGGTGAAGCTCTCGTTGATGCCATAATTTGTGGAATGAGAGAAACAGGACCGTGTTCCAAAAAAATTGAGAGCAACTATGGTTCTGTATTAGTAGAAGCATGTAAGCTGGCTCTAGTTACTCGTTGGGCTGGCGATCATCATATCAGGTTTTGGAAACAAGGAATTGATAGAGTCCTCCTTAGTCTTCTGATTGAAAATATTCATGACCAATCAACTGAATTTGCCTTGTCATTGGAAAAACAAATATCCATGGTGAAAGAGGGACTGAAAGTCAATTATCACGTTGGTCTGAGGAGTTATGTGTGGGACATTCTTGGGTGGCTTACAATTCATTTTGTAGAAAACTCAAACCCTTACAATTATACCCATGAGAGTGAACTCCACATCAACTTACTAATTCTGTGTGCTTGCTTCACTTTTGTGGAAGCAATTGAAAAATGGTGCCGGATATGTCAAAATGATGTTGATGATAATTTTCAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATATATTCTCCATGTAATTATATTTCTTCACATGCTAGATTTGTATTATCTGATATACTAAAGGTCAAAGGCAATCCATGCTTGAAAAACTCACTACACACCCTAGATTATATAGCATCCCTAAAAAGCTATAGTTCATTTGATAAACTTCAACTTGTTATTAACTTAATTGGGTTGACCTGTCTTTCAAGTTTACCACAGTATCAAAGATGTATCATAGAAAGCAAAGGGATAAAGGCTGTTGTTCTTCTTGTGCAACGATGCCTAAGTAATGATATTCGTGTGGAAAGGCCTGAAGTTGCTCCTCATTTGCATACTGTATTCCATAAAAGGTCTTGTTGCTGGATTGGTAAAGGAGGCTGGGAGGGTTCCAATAGCCTCTTATTTTATGGTCTGTGGGGCTTAGCTGAATTTCTTCATCAGTGTTGCCTTTTACCAGACAATCCTCAGCAATTTACTAGAGAGGTGACAAACATTAACACTGAGTTAGTTAACAAACTTCATGAGATCTGTAGTAGCAACTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTTCCAAAAGGATTGGGAAATCTCTTAATAAGGAAGAATATGCAGATTTGCGACTCATTGTAGTAAATGGGGATTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTTCTACCTTCTGAAGTGTTATCTAGTAGTAAGAGTTCTAAAGAAATAACAGATCATTTTGTTGGAGAGACAGTGAGAGAAGTTCGTTATTCTTCTCATGTTGATTATGAAGCATTGTTGTTATTGTTGGAATATGTGTATTGGGGACACTTGCATGCAGCAGAAGAAGAAACTGTAAAGAAGCTCAAAATTCTTGCTAAGCGTTGCAATCTACAACCTCTCTTGCAACTGCTTTGTAGACAATCTCCAAAGTGGGGTGCACCTTTCCCCAGCTTTAATCTTACTTCATCTCTTGATTCAGCCGGAAGTTACTTTTTTGATGTCATAATAGAAGCTAAATCGAATGAGTTTGTTGGATGGACATGTAATATATGTTCTCACCCAGTACCACATTTGCATGCTCACAAAGTTATATTGCAGTCTGGCTGTGACTATTTACAGGGTTTGTTCAGATCAGGAATGCAAGAGAGTCATTCACAAGTCATTAAGGTTGATATTAGCTGGGAAGCATTGGTTAAGCTAGTACATTGGTTTTACTCTGATGAGCTGCCGAATCCCCCTTCTGGTTGTTTGTGGGTTAACATGGATGATCAAGAAAAGCTATTCCATTTGCAGCAATATGTGGAGCTTTGTTGGCTTGGTGAGTTCTGGATTTTGGAAAGTATTCAGGAAGCCTGCTGGAATGCGATTATGTCTTGTCTTGGTTCTTCTAAGCAGTTGTCCATTAAAATAATTAAAATGGCTTATAAGCTCTCTTTGTGGAAGTTGGTTGACATTGCGGCAAATCTCATGGCTCCTTCGTATAGGCAATTACGGGATTCTGGTGAACTTGAAGAATTTGATGAGGCACTAGTTCACTTCATTTATTCTGCTTCTATTGAACTTAACCATGAAGGTGAAAAACGCTTTAGGTGA 3072 0.3854 MIHSTTKSAKEKENDRAISSHILTLHRRLLHALNLGTRHFDDKTNRWKWQCVNIEVQKNVLRSTTAFLDSVAGDARAIRHTIVKESAADILGALLWILQCKSEPLLSMASNVAVKLVSVLPSQQLQLRLLDLVYCLSSLLSSHQVEVAIPSATALNLVISNLSATSEKPVIEALKETEISICIVQNIKDCGAKKIEYFVEMASLLSTVLLRWSSSRFPVCNDVELMKVLANMHTKTDSSIKLVLLKLYTSLALCDSVVQKLIEGGKVFLQMIVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVMDLCGEALVDAIICGMRETGPCSKKIESNYGSVLVEACKLALVTRWAGDHHIRFWKQGIDRVLLSLLIENIHDQSTEFALSLEKQISMVKEGLKVNYHVGLRSYVWDILGWLTIHFVENSNPYNYTHESELHINLLILCACFTFVEAIEKWCRICQNDVDDNFQSEPVSRAVLMMIYSPCNYISSHARFVLSDILKVKGNPCLKNSLHTLDYIASLKSYSSFDKLQLVINLIGLTCLSSLPQYQRCIIESKGIKAVVLLVQRCLSNDIRVERPEVAPHLHTVFHKRSCCWIGKGGWEGSNSLLFYGLWGLAEFLHQCCLLPDNPQQFTREVTNINTELVNKLHEICSSNSFSPGVKWYVSYILSYFGFYGFPNEFSKRIGKSLNKEEYADLRLIVVNGDSVSVHGVILAVRCPSLLPSEVLSSSKSSKEITDHFVGETVREVRYSSHVDYEALLLLLEYVYWGHLHAAEEETVKKLKILAKRCNLQPLLQLLCRQSPKWGAPFPSFNLTSSLDSAGSYFFDVIIEAKSNEFVGWTCNICSHPVPHLHAHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWEALVKLVHWFYSDELPNPPSGCLWVNMDDQEKLFHLQQYVELCWLGEFWILESIQEACWNAIMSCLGSSKQLSIKIIKMAYKLSLWKLVDIAANLMAPSYRQLRDSGELEEFDEALVHFIYSASIELNHEGEKRFR* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0263 1023 Gene3D - 48 383 IPR011989 -
Psa1g0263 1023 PANTHER OS06G0674800 PROTEIN 8 1017 IPR044953 -
Psa1g0263 1023 CDD BTB_POZ_ZBTB_KLHL-like 824 923 - -
Psa1g0263 1023 SMART BTB_4 694 805 IPR000210 GO:0005515
Psa1g0263 1023 SMART BTB_4 825 953 IPR000210 GO:0005515
Psa1g0263 1023 SUPERFAMILY POZ domain 673 798 IPR011333 -
Psa1g0263 1023 ProSiteProfiles BTB domain profile. 825 906 IPR000210 GO:0005515
Psa1g0263 1023 Pfam BTB/POZ domain 850 912 IPR000210 GO:0005515
Psa1g0263 1023 Pfam BTB/POZ domain 686 796 IPR000210 GO:0005515
Psa1g0263 1023 SUPERFAMILY POZ domain 850 950 IPR011333 -
Psa1g0263 1023 ProSiteProfiles BTB domain profile. 694 774 IPR000210 GO:0005515
Psa1g0263 1023 Gene3D Potassium Channel Kv1.1; Chain A 819 993 IPR011333 -
Psa1g0263 1023 Gene3D Potassium Channel Kv1.1; Chain A 676 801 IPR011333 -
Psa1g0263 1023 SUPERFAMILY ARM repeat 83 680 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0263 Psa-Chr1 14513846 14522564 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Psa1g0263 BTB 0.00015 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0263 - - gsj:114385670 1537.7