Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g0261 | ATGATAAAAGATTATATGTTTATTGGATTCAATTGTACATGTTTGGCCCATAAATTCCCCACGAATAACCCGAAACCCATAAAAAAAACCCAACACCCACAAACACCTATTCACTTTCTGCTGTTCCTAAACGCTAGCAAAAAAAAACCTAGCCACCTCCAAGAACCTCAAAACCACATACACAACAATCATCAATCGAGGTTCGCTTTCGAAGAGGCTCTTGTCGTGTCTGTAACCTTAAACAACAAACCTCTCTTCTTTCGTCTTTCTTCTTGCATCAGATTTGCTCACTGTAGCTTCTCTACTCATCCACTAATTGCAGCCAAAATGTCGCGGAAGGGGTTGATGGAACAAGACCTGAGTAAGTTGGATGTGACAAAACTGCATCCACTTTCTCCTGAAGTCATATCTCGCCAGGCTACTATCAATATTGGCACCATAGGTCATGTGGCACATGGAAAGTCGACTGTTGTGAAAGCAATATCAGGTGTTCAGACTGTGCGTTTTAAAAATGAGTTGGAACGTAACATTACAATCAAGCTTGGTTATGCAAATGCAAAAATATACAAGTGTGAAGATGAGCGGTGTCCAAGGCCTATGTCCTACAAGGCTTATGGAAGTGGAAAGGAAGATAATCCTTTGTGTGACGTACTAGGGTTTGAAAATTCCAAGATGAAATTGCTGAGACATGTTTCTTTTGTTGATTGCCCAGGACATGATATTCTCATGGCTACTATGCTTAATGGAGCAGCAATCATGGACGGTGCTTTGCTACTCATTGCTGCTAATGAAAGCTGCCCGCAACCACAAACTTCTGAGCATTTAGCTGCCGTGGAAATTATGCGTCTACAGCACATAATTATCCTTCAGAACAAGGTAGACTTGATTCAAGAAAATGTGGCAATCAACCAGCATGAAGCAATTCAGAAGTTTATTCAAGGAACTGTTGCTGATAGTGCACCAGTAGTACCTATTTCAGCACAATTGAAGTATAATATTGATGTTGTGTGTGAGTACATTGTGAAAAAGATCCCTATCCCTGAACGGAATTTCATTTCTCCACCTAATATGATAGTAATTCGGTCATTTGATGTCAATAAACCCGGTTATGAGGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTAAGGGGTGTTTTAAAGGTCAACCAATTCATTGAAGTTCGACCTGGAATAGTTGTTAAAGACGAGAGTGGAAACATCCGATGCACACCTATCTACTCGAGAATAGTTTCATTATATGCTGAACAAAATGAGCTTCAGTTTGCAGTTCCTGGAGGCCTTATTGGTGTTGGAACAACAATGGACCCCACCTTGACTCGTGCTGACAGGTTGGTAGGGCAAGTTCTTGGAGAGGTTGGATCACTGCCCGAGGTTTTTGTGGAACTTGAGGTAAACTTTTTCTTGCTTCGACGGCTTCTTGGTGTCCGGACAAAAGGTTCGGAGAGACAAGGAAAAGTCGCAAAACTGGCGAAAGGAGAGATGCTTATGTTGAACATAGGATCAATGTCAACAGGTGCCAGAGTGGTTGCTGTGAAGAATGACTTGGCGAAATTGCAACTTACTTCCCCTGTGTGCACCAGCAAGGGTGAGAAGATTGCTCTAAGTAGACGTGTCGAGAAGCATTGGCGTCTTATCGGCTGGGGCCAAATCCAAGCTGGAATCACCCTTGAAGTCCCTCCTGCACCCATTCTGAGTTGA | 1728 | 0.4253 | MIKDYMFIGFNCTCLAHKFPTNNPKPIKKTQHPQTPIHFLLFLNASKKKPSHLQEPQNHIHNNHQSRFAFEEALVVSVTLNNKPLFFRLSSCIRFAHCSFSTHPLIAAKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDNPLCDVLGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVAKLAKGEMLMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLEVPPAPILS* | 576 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g0261 | 575 | CDD | eIF2_gamma_II | 350 | 463 | IPR044127 | GO:0000049 | |
Psa1g0261 | 575 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 464 | 561 | IPR009001 | - | |
Psa1g0261 | 575 | Pfam | Elongation factor Tu domain 2 | 377 | 459 | IPR004161 | GO:0005525 | |
Psa1g0261 | 575 | CDD | eIF2_gamma_III | 466 | 560 | IPR015256 | - | |
Psa1g0261 | 575 | Pfam | Initiation factor eIF2 gamma, C terminal | 471 | 560 | IPR015256 | - | |
Psa1g0261 | 575 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 139 | 348 | IPR000795 | GO:0003924|GO:0005525 | |
Psa1g0261 | 575 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 132 | 351 | IPR027417 | - | |
Psa1g0261 | 575 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER | 110 | 572 | - | - | |
Psa1g0261 | 575 | Pfam | Elongation factor Tu GTP binding domain | 141 | 345 | IPR000795 | GO:0003924|GO:0005525 | |
Psa1g0261 | 575 | Gene3D | Translation factors | 466 | 564 | - | - | |
Psa1g0261 | 575 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 | 110 | 572 | - | - | |
Psa1g0261 | 575 | PRINTS | GTP-binding elongation factor signature | 143 | 156 | IPR000795 | GO:0003924|GO:0005525 | |
Psa1g0261 | 575 | PRINTS | GTP-binding elongation factor signature | 232 | 242 | IPR000795 | GO:0003924|GO:0005525 | |
Psa1g0261 | 575 | PRINTS | GTP-binding elongation factor signature | 248 | 259 | IPR000795 | GO:0003924|GO:0005525 | |
Psa1g0261 | 575 | PRINTS | GTP-binding elongation factor signature | 286 | 295 | IPR000795 | GO:0003924|GO:0005525 | |
Psa1g0261 | 575 | SUPERFAMILY | Translation proteins | 349 | 463 | IPR009000 | - | |
Psa1g0261 | 575 | Gene3D | Translation factors | 352 | 465 | - | - | |
Psa1g0261 | 575 | CDD | eIF2_gamma | 142 | 349 | IPR044128 | GO:0005525 | |
Psa1g0261 | 575 | Gene3D | - | 139 | 349 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g0261 | Psa-Chr1 | 14352729 | 14356954 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g0261 | 110 | 572 | Eukaryotic Initiation Factors Gene Family | AT1G04170 | 91.164 | 0.0 | 877 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g0261 | K03242 | - | gmx:100784099 | 899.042 |