Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0256 ATGTCTTGCTTCACACGACCTGCTCCTGCTTCACCTAGGACTGCACGCCAGCTGCAAATTCACACAACAAAAAGGAAGAAAAACCTTCAAAATTCAGACTCTGAGAAAGGACTTGGTTTTGCACCAATTTTGAGTAAATTCAATTTTGTGAAGAAGGTTGGTAAGAAAGGGTGTGTTCCAATCATTGACTATGAGCAAATAGAAAAAGGCACTGAAAATTTCAAGGAAAGTAACATCTTAGGTGAAGTTGGTTTTGGATGTGTTTACAAGGTTAGTTTGGATGATAATTTGTTGGTTGCAATCAAGAGGTTGAACTGTGAATGTCAATATGCAGAAAGAGAGTATGAGAATGAGGTGGAATTGTTAAGTGAAATTCAACATCCAAATGTAATTTCTCTACTTGGTTGTGGAACTCATGAGGATTCAAGGTTTATTATCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAATTACCTGAACCTTCTCATGGCTCTGCATTGACATGGCACATGAGGGTGAAGATTGCTCTTGACACAGCAAGAGGCTTGAAGTATCTGCATGAGCACTGA 573 0.3874 MSCFTRPAPASPRTARQLQIHTTKRKKNLQNSDSEKGLGFAPILSKFNFVKKVGKKGCVPIIDYEQIEKGTENFKESNILGEVGFGCVYKVSLDDNLLVAIKRLNCECQYAEREYENEVELLSEIQHPNVISLLGCGTHEDSRFIIYELMQNGSLETQLPEPSHGSALTWHMRVKIALDTARGLKYLHEH* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0256 190 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Psa1g0256 190 PANTHER OS01G0750732 PROTEIN 25 190 - -
Psa1g0256 190 Gene3D Transferase(Phosphotransferase) domain 1 150 190 - -
Psa1g0256 190 PANTHER BNAA04G14780D PROTEIN 25 190 - -
Psa1g0256 190 ProSiteProfiles Protein kinase domain profile. 74 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0256 190 SUPERFAMILY Protein kinase-like (PK-like) 56 188 IPR011009 -
Psa1g0256 190 MobiDBLite consensus disorder prediction 1 32 - -
Psa1g0256 190 Pfam Protein tyrosine and serine/threonine kinase 77 189 IPR001245 GO:0004672|GO:0006468
Psa1g0256 190 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0256 Psa-Chr1 14267668 14269261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0256 25 190 Receptor kinase-like Gene Family AT1G80640 42.857 4.85e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Psa1g0256 PK_Tyr_Ser-Thr 5.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0256 - - gmx:100785380 254.603