Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0249 ATGGCTTCATTCCAACCCTTCAACTTTGAAACTCAAATTCCCCAAGAGCTTTTGATATCTCAAATCATGCAAATTCATGCAACAATTTCAAAGCTAGAATCTCTTAGGCCATCAAAACAAGTCAACACCCTTTTGACTCACTTGGTCAAACTTTGCACCCTCCCTTCATCCATTGACATTGAAGCCTTACCACAAGAGGTTAAGAAAATGCGTGAGAGCCTCATTCCCATTTGTGGCAAAGCTGAAGGACTTTTAGAGCTTGAATTCTCATCTTTCATTAGCCTCACACCAAATCCAATGAAAAACTTGACACTTTTCCCTTACTACGGAAACTATGTTAAGCTAGCAAACTATGAGTACAAAATCCTCAAAGAAAACGGCGTTGCGAATGCGAAAAAAGTAGCTTTCGTAGGTTCGGGTCCAATGCCACTAAGTTCAATCATATTAGCAACTCATCACATGGAATCAACGCAATTCGATAATTTTGATATCGATGAGAAGGCTAATGAGGTCGCTAGTAAGATCGTGGATTCGGATAAAGCGCTTGAGAAGAGGATGAAGTTTGTGACACAAGATGTTATGGAAGTTAAAGAGAGGTTGGGACATTATGATTGCATATTTTTGGCAGCGCTTGTTGGTATAAGTAGATGTGAAAAAGTGAAGATTTTGGGACATATAAGAAAGTATATGAAAGAAGGTGGTGTTTTGCTTGTAAGAAGTGCAAAAGGGAGTAGAGCTTTTTTGTACCCTATTGTTGAAGAAGATGATATGGTGAATTTTGAAGTGCTTACTATCTTCCATCCAACTGATGATGTGATTAACTCGGTTGTTCTTCTTCGTAAGCCTAATGCTTGA 855 0.3871 MASFQPFNFETQIPQELLISQIMQIHATISKLESLRPSKQVNTLLTHLVKLCTLPSSIDIEALPQEVKKMRESLIPICGKAEGLLELEFSSFISLTPNPMKNLTLFPYYGNYVKLANYEYKILKENGVANAKKVAFVGSGPMPLSSIILATHHMESTQFDNFDIDEKANEVASKIVDSDKALEKRMKFVTQDVMEVKERLGHYDCIFLAALVGISRCEKVKILGHIRKYMKEGGVLLVRSAKGSRAFLYPIVEEDDMVNFEVLTIFHPTDDVINSVVLLRKPNA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0249 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
Psa1g0249 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Psa1g0249 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Psa1g0249 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 242 IPR029063 -
Psa1g0249 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Psa1g0249 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Psa1g0249 284 CDD AdoMet_MTases 162 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0249 Psa-Chr1 13830527 13832000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0249 15 281 Nicotianamine Synthase Gene Family AT5G56080 51.292 6.01e-92 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0249 K05953 - gmx:100819726 460.299