Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0243 ATGACTGATGAGGTTGTTCTGCTAGATTTTTGGCCTAGTCCTTTTGGAATAAGGGTGAGGATAGCCCTTGCTGAAAAGGGTATCAAGTATACATACATAGAAGAAGATTTGATGTCTTTGAAAAAAAGCCCTTTGCTGCTACAAATGAACCCGGTTCAGAAGAAAATCCCGGTTCTCATTCACAACGGAAAAACCATTTTTGAATCTCTAATTGCTGTTCAGTATATTGATGAAGTTTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCCTTACCAGAGATCACAAGCTAGATTCTGGGCTGAGTATGTTGACAATAAGATATATTCAATTGGAAGGAACATTTACACCAAAAAAGGAGAAGAACAAGAAGTTGCAAAGAAAGAATTCATAGATACTCTCAAACTGCTAGAGGAACAACTGGAAGAGAAGTCTTATTTTGGAGGAGACAAGTTTGGTTTTGTGGATATTTCACTCATTCCATTCTACAGCAGATTAAAAGTTTTTGAGACCTTTGGCAACCTCAACTTAGAGAGTGAGTGTCCTAAGTTCATTGCTTGGGCTAAGAGATGCATGCAGATTGAGAGTGTTTCCAAGTCTCTTCCTGACCAGGATAAGATCTATGAGTTTATTGTTGACATGAGAAAGTTGTTAGGTATTGAGTAG 666 0.3799 MTDEVVLLDFWPSPFGIRVRIALAEKGIKYTYIEEDLMSLKKSPLLLQMNPVQKKIPVLIHNGKTIFESLIAVQYIDEVWNDRSPLLPSDPYQRSQARFWAEYVDNKIYSIGRNIYTKKGEEQEVAKKEFIDTLKLLEEQLEEKSYFGGDKFGFVDISLIPFYSRLKVFETFGNLNLESECPKFIAWAKRCMQIESVSKSLPDQDKIYEFIVDMRKLLGIE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0243 221 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Psa1g0243 221 SUPERFAMILY Thioredoxin-like 5 109 IPR036249 -
Psa1g0243 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 210 IPR010987 -
Psa1g0243 221 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Psa1g0243 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Psa1g0243 221 Gene3D - 90 221 - -
Psa1g0243 221 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Psa1g0243 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Psa1g0243 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 214 - -
Psa1g0243 221 SUPERFAMILY GST C-terminal domain-like 78 217 IPR036282 -
Psa1g0243 221 CDD GST_N_Tau 5 80 - -
Psa1g0243 221 Gene3D Glutaredoxin 1 89 - -
Psa1g0243 221 Pfam Glutathione S-transferase, C-terminal domain 126 190 - -
Psa1g0243 221 SFLD Main (cytGST) 2 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0243 Psa-Chr1 13400243 13401403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0243 1 221 Glutathione S-transferase Gene Family AT1G17180 60.633 2.22e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0243 K00799 - gmx:547520 356.295