Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0236 ATGGCAAACGATGAGGTGGTTCTGTTGGATAAATGGGCTAGCATGTATGGGATGAGAGTTAGAATTGCATTAGCTGAAAAAGGTATTAAGTATGAATCCAAAGAAGAAGATTTCAATAATAAGAGTGATTTGCTTCTTCAATCCAACCCTATTCATAAGAAGATTCCAGTTCTTATCCATAATGGTAAATTCATTTCTGAATCTGGAATTATTGTCCAGTACATTGATGAGGTTTGGAATCATGAAACTCCATTCTTGCCCAAAGACCCTTATGAGAGAGCTCAAGCTAGATTCTGGGTTGATTACATTGACAAAAAGGTTTTTGATACTTGGATGAAAGTGTGGCTTTCAAAAGGGGAAGAATATGAAGAAGCAAAGAAGGAGTTGATCTCTATCTTTAAGACACTAGAGGAGACATTAGGTGACAAGACATTTTATGGTGGTGACACTTTTGGGTATCTTGATATTGGTTTGGTCCCTTTTTATAGTTGGTTTTATACTTTTGAGACATATGGTAACTTCAAATTTGAAGTGGAGACTCCTAAACTTGTGGCTTGGGGAAAGAGATGCGTTGAGAAAGAAAGTGTTTCAAAATCACTTCCTGATGAGATTTGA 615 0.3642 MANDEVVLLDKWASMYGMRVRIALAEKGIKYESKEEDFNNKSDLLLQSNPIHKKIPVLIHNGKFISESGIIVQYIDEVWNHETPFLPKDPYERAQARFWVDYIDKKVFDTWMKVWLSKGEEYEEAKKELISIFKTLEETLGDKTFYGGDTFGYLDIGLVPFYSWFYTFETYGNFKFEVETPKLVAWGKRCVEKESVSKSLPDEI* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0236 204 SFLD Main.3: Omega- and Tau-like 2 203 IPR045073 -
Psa1g0236 204 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
Psa1g0236 204 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 203 - -
Psa1g0236 204 Gene3D Glutaredoxin 2 88 - -
Psa1g0236 204 Pfam Glutathione S-transferase, C-terminal domain 121 186 - -
Psa1g0236 204 SFLD Glutathione Transferase (cytosolic) 2 203 IPR040079 -
Psa1g0236 204 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 203 IPR045073 -
Psa1g0236 204 Gene3D - 89 204 - -
Psa1g0236 204 CDD GST_C_Tau 90 202 IPR045074 GO:0004364|GO:0006749
Psa1g0236 204 CDD GST_N_Tau 6 79 - -
Psa1g0236 204 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 204 IPR010987 -
Psa1g0236 204 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Psa1g0236 204 SUPERFAMILY GST C-terminal domain-like 77 202 IPR036282 -
Psa1g0236 204 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0236 Psa-Chr1 13165791 13166492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0236 1 202 Glutathione S-transferase Gene Family AT1G78380 64.356 3.31e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0236 K00799 - gmx:547950 339.732