Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0235 ATGCAATACTTCAGGAAAGGCTTCGGTTATCACAGGGGTGAAGAAAAAAACTTTTCTCCAGAGGAAATATCATCTATGATCCTCACAAAAATGCGGGAAATCGCAGAGAAACTTTTGGAGACACCTATTAAAAATGCAGTGATTACAGTCCCGGCCTATTTCAATGATTCTCAGCGAAAAGCCGCCATAAATGCTGGTGCCATTGCAGGCTTGAATGTAATGCAGATGATCAATGAACCAACTGTTGCTACCCTTGCATATGGCCAATGTGATACCGTAACTGCAAGTACTTCATCCTGGGTGACGGCGGCTGAAAAGTGGTTGAGCTTGTTACTGGTTCTTCCAGAATTCGGGACTGTTGAAGATTGGTTCAAGGAGTGA 381 0.4357 MQYFRKGFGYHRGEEKNFSPEEISSMILTKMREIAEKLLETPIKNAVITVPAYFNDSQRKAAINAGAIAGLNVMQMINEPTVATLAYGQCDTVTASTSSWVTAAEKWLSLLLVLPEFGTVEDWFKE* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0235 126 SUPERFAMILY Actin-like ATPase domain 11 88 IPR043129 -
Psa1g0235 126 Gene3D - 6 110 - -
Psa1g0235 126 Pfam Hsp70 protein 14 89 IPR013126 GO:0005524|GO:0140662
Psa1g0235 126 PANTHER HEAT SHOCK PROTEIN 70KDA 12 88 IPR013126 GO:0005524|GO:0140662
Psa1g0235 126 PANTHER HEAT SHOCK 70 KDA PROTEIN 12 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0235 Psa-Chr1 13104440 13106352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0235 11 88 Calmodulin-binding Proteins AT3G12580 71.795 1.62e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0235 K03283 - egr:104450646 121.709