Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0232 ATGGAAGAACCCACATTTCTGTTCCCACCACCAGACTCAGACCTCGACCTCAGTTTCACCAGCACCACCACTGACCGGACATTCACCTCCTCCAGCGCTCGCACCAGCTTAGCCCGCACAAGCAGTCTCGCTCTCAGCTTTAACGATCGTCTCTCAACCGCCTCAGCCGCTGCCGGAGATACCGTTTCCTCCGCAATCATACGACGTCCTCACCGTAGCTCTGACCCTAACTGGACTGCAATCAAGGCCGCAACAAATCTGTCCTCCGACGGCCGTCTCCACCTCCGTCATTTAAAGCTGCTCCGCCACCTTGGCTCCGGAGATCTCGGCCGTGTTTTCCTCTGCCGTCTACGTGACTACGATGGTGCAAATTTCGCACTTAAAGTTGTTGATAAAGACCTTCTCACTCTTAAGAAATCCACTCACGCGGAAACAGAAGCAGAGATCCTTCACGCGCTCGATCATCCTTTTCTCCCCACGCTCTACGCGCGTATCGACGTTTCTCACTACACCTGCCTCTTAATCGACTACTGCCCCGGCGGAGACCTCCACTCTCTCCTCCGCAAACAACCGGGAAACCGCTTTACACTCTCCGCAGCTCGTTTCTTCGCCGCCGAGATCCTCGTCGCACTCGAATATCTCCACGCGCTCGGCGTCGTCTACCGCGATTTAAAACCCGAGAACGTGCTTATACGTGAAGACGGACACGTCATGCTTTCAGATTTTGATCTCTGCTATAAAGCTGACGTGTCACCCACATTTGAATTTTCAACCAATCATAAACTTCACGTGGATCCCACTCACGGTTGTTTCAGTTATAACAGATCAAAATCACGAGAGAGTGTAACCGCTGAGTTTGTTGCGGAACCAACAACGGCGTTTTCACGGTCGTGCGTCGGAACTCACGAGTATTTAGCGCCGGAGCTTGTTTCTGGTAACGGTCACGGTAACGGCGTGGATTGGTGGGCGTTTGGTGTTTTTATTTACGAGCTTTTATACGGAACGACGCCGTTTAAGGGGTGTAACAAAGAGAGCACGCTGCGCAATATAGCATCTAACAAGGACGTGAAGTTCCACGTGGCGGAGAATGAGGAGGTGGGAATGGTGGGAGCGAGGGACTTGATAGAGAAGTTGTTAGTAAAAGATCCGAGAAGGAGGCTAGGATGCGCCAGAGGTGCAACGGATATTAAACGGCACCCTTTTTTTGATGGGATTAAGTGGCCTTTGATTAGGACTTATAAGGCACCTGAAGTTAAGGGACTATTGAGGAGGAAAAAATCAGAATCGAGTTTGAGTCATTTGAGTAGTAAGAGGAAGAGAGGGTGGTGGAAGAGACTTGGATGTGTGTTGAGAAATAAAGGAGCTAGATTTGATTTACTTTCGAATTATAGTAATAATAATCATTATTATTCTTATGTTAATAATAGTAAGGTTAGGTAA 1440 0.4917 MEEPTFLFPPPDSDLDLSFTSTTTDRTFTSSSARTSLARTSSLALSFNDRLSTASAAAGDTVSSAIIRRPHRSSDPNWTAIKAATNLSSDGRLHLRHLKLLRHLGSGDLGRVFLCRLRDYDGANFALKVVDKDLLTLKKSTHAETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHSLLRKQPGNRFTLSAARFFAAEILVALEYLHALGVVYRDLKPENVLIREDGHVMLSDFDLCYKADVSPTFEFSTNHKLHVDPTHGCFSYNRSKSRESVTAEFVAEPTTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGCNKESTLRNIASNKDVKFHVAENEEVGMVGARDLIEKLLVKDPRRRLGCARGATDIKRHPFFDGIKWPLIRTYKAPEVKGLLRRKKSESSLSHLSSKRKRGWWKRLGCVLRNKGARFDLLSNYSNNNHYYSYVNNSKVR* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0232 479 PANTHER FLIPPASE KINASE 1-RELATED 11 457 - -
Psa1g0232 479 CDD STKc_phototropin_like 105 418 - -
Psa1g0232 479 Gene3D Phosphorylase Kinase; domain 1 97 181 - -
Psa1g0232 479 Gene3D Transferase(Phosphotransferase) domain 1 295 416 - -
Psa1g0232 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Psa1g0232 479 PANTHER TELOKIN/MYOSIN LIGHT CHAIN KINASE-RELATED 11 457 - -
Psa1g0232 479 Pfam Protein kinase domain 100 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0232 479 SMART serkin_6 98 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0232 479 SUPERFAMILY Protein kinase-like (PK-like) 77 416 IPR011009 -
Psa1g0232 479 Gene3D Transferase(Phosphotransferase) domain 1 182 250 - -
Psa1g0232 479 ProSiteProfiles Protein kinase domain profile. 98 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0232 Psa-Chr1 12813934 12816000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0232 1 476 AGC Kinase Gene Family AT3G14370 64.286 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa1g0232 Pkinase 2.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0232 - K08286 lja:Lj0g3v0200189.1 681.789