Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0210 ATGGAATGGGTTTCTGGCATAATTTTCATCTTTTTGACACTTGGTTTGATATATGCTTGGAGGATGTTGAATTTGTTGTGGCTTAGGCCAAAGAAGCTGGAGAAGCTGTTAAGAGAACAAGGTCTTCATGGTAATACATATAGGATTTTGGTTGGGGATGTTAAGGATCTTTTTAAGATGCAAAAGGAAGCTAAATCCAAACCCATGAATCTCTCCGATGATATTGTTCCACGTGTCAGTCCCTACCTCCAAAAGAGTATTAAAATTCATGGGAAGAATTCTTATATTTGGTTCGGAGCAAAGCCAAGGGTGACTCTCACAAAACCTGAGCAAATAAAAGATGTATTGAACAAGATCTCTGAATTCCCAAGGAGAAATAATAAAATTTTCAAGTCACTAGTTAGTGGTCTAGCTAGCCTTGAAGGAGAAAAGTGGAGCAAGCATAGAAGGCTAATCAACCCTGCTTTCCAAATAGAAAAACTAAAGATTATGACACCATCTTTCTTGAAAAGTTGCAACGATCTGATAAGCAAATGGGAGGAATTGTTGTCTTCAAATGAATCGTGTGAGATAGACATATGGCCTTCTCTTCAAAACTTGGCTAGTGATGCTATTTCTCGAACCGCGTTTGGAAGTAGTTATGAAGAAGGAAAAAGAATATTTCAACTTCAAAGAGAGCTAGCTGAACTTATAATGAAAGATATAGTGAAATCTTTCATTCCTTTGTGGAGGTTTGTACCTACTAGTGTCCATAGAAATATGGAGAAAATTGACAGAGATATACAATCTTCTCTTAAAGATATCATTAACAAGAGAGAGAAAGCACTGGGTGAATCTACTACAAATGATTTATTGAGTATTCTTCTGGAGTCAAATGACAAGGAAATTGGAGAAAATACACACAACAAGAATGTAGGACTGACTCTTGATGATGTAGTGGATGAATGCAAATTGTTCTACTTTGCAGGACAAGAGACTACTTCAGTTTTACTTGTTTGGACAATGATATTATTGAGTAGGTACCCTAATTGGCAACAACGTGCAAGAGAGGAGGTGTTACAAATCTTTGGAAACAAAAATCCAGATTTTGATGGCCTAAATAATTTGAAGATCGTTACCATGATTTTATTTGAGGTTCTTAGGTTATATCCTCCTGTAGTTGGCCTTGTTCGACAGATTGAGAAAGATGTTAAACTTGAAAACTTAATATTACCCGCTGGAGTGGAAGTTTTCTTACCAATTCTTTTTCTTCATCATGATTGCGAACTCTGGGGAGATGACGCTAAGGAATTCAATCCTGAAAGATTTTCTGAAGGTGTTTTGAAAGCAACGAATGGAAGATATTCATTTTTTCCATTTGGAGGGGGTCCTAGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAGATGGGAATAGCAACGATTTTGCAACATTTCTCATTTGAACTTTCACCAACCTATGCTCATGCTCCATCCACCATGATTACTCTTCAACCACAGTATGGTGCTCAAATTGTTATACGTAAAGTGGAGACATAA 1545 0.3676 MEWVSGIIFIFLTLGLIYAWRMLNLLWLRPKKLEKLLREQGLHGNTYRILVGDVKDLFKMQKEAKSKPMNLSDDIVPRVSPYLQKSIKIHGKNSYIWFGAKPRVTLTKPEQIKDVLNKISEFPRRNNKIFKSLVSGLASLEGEKWSKHRRLINPAFQIEKLKIMTPSFLKSCNDLISKWEELLSSNESCEIDIWPSLQNLASDAISRTAFGSSYEEGKRIFQLQRELAELIMKDIVKSFIPLWRFVPTSVHRNMEKIDRDIQSSLKDIINKREKALGESTTNDLLSILLESNDKEIGENTHNKNVGLTLDDVVDECKLFYFAGQETTSVLLVWTMILLSRYPNWQQRAREEVLQIFGNKNPDFDGLNNLKIVTMILFEVLRLYPPVVGLVRQIEKDVKLENLILPAGVEVFLPILFLHHDCELWGDDAKEFNPERFSEGVLKATNGRYSFFPFGGGPRICIGQNFAMMEAKMGIATILQHFSFELSPTYAHAPSTMITLQPQYGAQIVIRKVET* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0210 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 503 - -
Psa1g0210 514 SUPERFAMILY Cytochrome P450 78 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 Pfam Cytochrome P450 88 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Psa1g0210 514 Gene3D Cytochrome P450 71 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PANTHER CYTOCHROME P450 72A11-RELATED 27 503 - -
Psa1g0210 514 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0210 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0210 Psa-Chr1 11896987 11906400 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0210 4 512 Cytochrome P450 AT3G14690 53.411 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0210 - K23809 gmx:100808323 729.554