Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0208 ATGACACTTGGTTTGATATGTGCATGGAGGGTGTTGAATTTGTTGTGGCTTAGGCCAAAGAAGCTAGAGAAGGTGTTAAGAGAACAAGGTCTTCATGGTAATTCATATAGGATCTTGGTTGGGGATGTTATGGATCTTTATAAGATGGAAAAGGAAGCTAAATCCAAACCCATGAATCTCTCCGATGATATTGTTCAACGTGTCAGTCCCTACCTCCAAAAGAGTCTTAAAATTCTTGGGAAGAATTCTTTTATTTGGTTTGGAACAAAACCAAGGGTGGTGCTTACAGAACCTGAGCAAATAAAAGATGTTTTGAACAAGATCACTGAATTTCCAAGGACTAATTATAAAATTTCCAAGTTACTAATTAGTGCTCTTGCTATTCATGAGGGAGAAAAGTGGAGCAAGCATAGAAAACTGATCAACCCTGCTTTCCATTTAGAAAAATTGAAGATTATGACGCCATCTTTCTTCATAAGTTGCAATGATTTGATTAGCAAATGGGAAGAAATGTTGTCTTCAGATGGGTCATGTGAAATAGACATATGGCCTTCACTTCAGAATTTGACAAGTGATGCTATTTCGCGAACAACATTCGGAAGTAGTTATGAAGAAGGAAAAAGAATATTTCAACTTCAAAAAGAGCAATCTTTCATTCCATTATGGATGTTTGTACCTACTACTTTCCATAGGAAGATGAATGAAATCGACAGAGATATAAGATCTTCGCTTAAATATATAATCAATAAGAGGGAGAAAGCACTAAAGATAGGTGAATCTACTATAAATGACTTACTGAGTATTCTTCTTGAATCAAATCACAAGGAGATTGAAGAAAATGCAAACGACAAGAATGTGGGAATAAGTCTTGAAGACGTAGTCGAGGAATGCAAGTTGTTCTACTTTGCAGGACAAGAGACTACTTCAGTTTTGCTTGTTTGGACAATGATGTTGTTGAGTAGGTACCCTAATTGGCAACAACGTTCAAGAGAGGAGGTGTTACAAATATTTGGCAACAAAAAACCAGATTTTGATGGCCTAAATAATTTGAAGATTGTGACCATGATTTTGTATGAGGTTCTTAGGTTATACCCTCCCGTACTTGAACTTGTTCGGAATGTTGAGAAAGACGTGAAACTTGGAAACCTAATATTACCTGTTGGAGTGGAAGTTTCGTTACCAATAGTTTTGCTTCACCATGACTGTGAACTTTGGGGTGATGATGCTAAGACGTTCAATCCTGAGAGATTTTCTGAAGGAATTTCCAAAGCAACAAATGGTAGACATTCCTTTTTTCCATTTGGAGGGGGTCCTAGAATTTGCATTGGACTAAGCTTTTCCTTAATAGAAGCAAAGATGGCAATAACAACCATTTTGCAGCATTTCGCATTTGAACTTTCACCAACCTATGCTCATGCTCCATCCTCAATGGTTACTCTTCAGCCACAATATGGTGTTCAAATTATTATACGTAAAGTGGAAACATAA 1488 0.3683 MTLGLICAWRVLNLLWLRPKKLEKVLREQGLHGNSYRILVGDVMDLYKMEKEAKSKPMNLSDDIVQRVSPYLQKSLKILGKNSFIWFGTKPRVVLTEPEQIKDVLNKITEFPRTNYKISKLLISALAIHEGEKWSKHRKLINPAFHLEKLKIMTPSFFISCNDLISKWEEMLSSDGSCEIDIWPSLQNLTSDAISRTTFGSSYEEGKRIFQLQKEQSFIPLWMFVPTTFHRKMNEIDRDIRSSLKYIINKREKALKIGESTINDLLSILLESNHKEIEENANDKNVGISLEDVVEECKLFYFAGQETTSVLLVWTMMLLSRYPNWQQRSREEVLQIFGNKKPDFDGLNNLKIVTMILYEVLRLYPPVLELVRNVEKDVKLGNLILPVGVEVSLPIVLLHHDCELWGDDAKTFNPERFSEGISKATNGRHSFFPFGGGPRICIGLSFSLIEAKMAITTILQHFAFELSPTYAHAPSSMVTLQPQYGVQIIIRKVET* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0208 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Psa1g0208 495 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PANTHER CYTOCHROME 5 489 - -
Psa1g0208 495 Pfam Cytochrome P450 80 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 Gene3D Cytochrome P450 16 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g0208 495 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 489 - -
Psa1g0208 495 SUPERFAMILY Cytochrome P450 67 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0208 Psa-Chr1 11823565 11825698 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0208 9 493 Cytochrome P450 AT3G14690 52.314 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0208 - K23808 gmx:100808323 714.916