Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0190 ATGTCAAACTGTTACAAGGCACTCCCAGCAGGAGGAAAACTAATAGCTTGTGAGCCTGTGTTGCCGGAGGATTCAGATGATAGCCACAGGACAAGGGCGTTGCTTGAGGGTGACATATTTGTGATGACGATTTACAGAGCCAAAGGAAAGCATAGGACAGAAGAGCAGTTTAAGCAGCTTGCAGTTTCTGCAGGTTTCAATCTTTTCAAAGCCTTTCATGTGGATCATTTCTACGCTGTTCTTGAGTTTCAGAAATGA 258 0.4419 MSNCYKALPAGGKLIACEPVLPEDSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQLAVSAGFNLFKAFHVDHFYAVLEFQK* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0190 85 Gene3D Vaccinia Virus protein VP39 1 85 IPR029063 -
Psa1g0190 85 PANTHER O-METHYLTRANSFERASE 1 84 IPR016461 GO:0008168
Psa1g0190 85 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 83 IPR029063 -
Psa1g0190 85 Pfam O-methyltransferase domain 2 67 IPR001077 GO:0008171
Psa1g0190 85 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 85 IPR016461 GO:0008168
Psa1g0190 85 PANTHER OS02G0823400 PROTEIN 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0190 Psa-Chr1 11016976 11018128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0190 1 85 Monolignol Biosynthesis Gene Families AT3G53140 74.118 2.90e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0190 - - gmx:100784957 158.688