Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0189 ATGGAAGAAGACACAGATTCACGAAAGCAAGCTAGGCTAGCCATTTTGGAACTAGCCAACATGATAAGTGTCCCTATGTCCTTAAACGCCGCCGTACGCCTCAACGTTGCCGACGCCATCTGGGAAGGTGGTTCCAACGCGCCTCTCACCGCCGCTCAGATCCTCGCGCGTGTAATTCCAACCGGTGGCGGTGACGCCGAGAATCTTCAGCGCGTTTTACGCATGCTCGCTAGTTACGGCGTGTTTGAAGAGCATATTGGTGGCGGTGAAAGGAAGTACTCTCTTACCGACGTGGGGAAAACTCTTGTCACCGATGAACAAGGCTTATCGTATGGCTCTTACGTGCTCCAACACCACCAGGATGCGTTGATGAGAGCATGGCCATTGGTACATGAAGCAGTTGTGGACCCATCAAAGGAGCCATTTGAAAGGGCTAATGGAGAAGGAGCCTATGATTATTACCTAAAGAAACCAGAGATGAATGAGTTAATGTTGAAGGCTATGTCAGGGGTATCAGTGCCGTTCATGAAGGCCCTTTTGGGGGGCTACCATGGATTTCAAAATGTGGAGAAGCTGGTTGATGTTGGTGGTAGTGGTGGTGATTGTCTCAGAATGATCTTGCAGAAATATCCTAATATCAAACAAGGGTTAAACTTTGATCTTCCAGAAGTTGTGGCTAAAGCACCACAAATTCCAGTTGGTGGTATTCGGTTGTGA 717 0.4854 MEEDTDSRKQARLAILELANMISVPMSLNAAVRLNVADAIWEGGSNAPLTAAQILARVIPTGGGDAENLQRVLRMLASYGVFEEHIGGGERKYSLTDVGKTLVTDEQGLSYGSYVLQHHQDALMRAWPLVHEAVVDPSKEPFERANGEGAYDYYLKKPEMNELMLKAMSGVSVPFMKALLGGYHGFQNVEKLVDVGGSGGDCLRMILQKYPNIKQGLNFDLPEVVAKAPQIPVGGIRL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0189 238 PANTHER OS02G0823400 PROTEIN 4 231 - -
Psa1g0189 238 Gene3D Vaccinia Virus protein VP39 107 238 IPR029063 -
Psa1g0189 238 Gene3D - 1 106 IPR036388 -
Psa1g0189 238 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 238 IPR016461 GO:0008168
Psa1g0189 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 235 IPR029063 -
Psa1g0189 238 Pfam O-methyltransferase domain 131 231 IPR001077 GO:0008171
Psa1g0189 238 SUPERFAMILY "Winged helix" DNA-binding domain 7 105 IPR036390 -
Psa1g0189 238 PANTHER O-METHYLTRANSFERASE 4 231 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0189 Psa-Chr1 11015867 11016872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0189 3 235 Monolignol Biosynthesis Gene Families AT3G53140 71.901 2.35e-121 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0189 - - lja:Lj0g3v0200389.1 399.053