Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0185 ATGCAGAAGGATCAACTCAAAAAGGATATTAAAGAGGTAAAGTTTTTCACCGAGTATGGAGATGCCAACAGATACAAAATTCTTGAAGTTATTGGTAAGGGTAGTTACGGAGTTGTTTGTGCAGCAATTGACACACACACTGGTGGAAAAGTTGCAATCAAGAAGATTCATGATGTTTTTGAACATAACTGCGATGCCATTAGAATCCTCAGGGAAGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGAGATTAAGAGGATTATGTTGCCGCCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTCTTTGAGCTCATGGAGTCTGACCTACATCAAGTCATCAAAGCTAATGATGACTTGACCCGTGAACACCAACAGTTTTTTCTTTATCAGATGCTTCGTGCATTGAAGTTTATGCATACAGCAAATGTATATCACAGAGACCTTAAGCCGAAGAATATACTGGCAAATGCAAACTGCAAACTCAAAGTCTGTGATTTTGGACTTGCACGAGTTGCATTCAATGATACCTCAACAACAACTTTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCCCCTGAATTATGCGGTTCTTTCTTTGCTAAGTACACGCCCGCAATTGATATATGGAGCATTGGATGCATTTTTGCAGAAGTGCTGACAGGAAAGCCATTGTTTCCTGGTAAAAGTATCGTGCATCAATTAGATTTGATCACTGATCTTCTTGGAACACCACCATCTGAAATTATTGCAGGAGTTCGAAATGAGAAGGCAAGGAAGTACTTGATGGATATGAGGAAGAAACTTCCTGTGCCATTTGAAAGAAAATTTCCAAATGCTGATCCATTGGCACTTCGGCTATTGCAAAGGCTTTTGGCATTCGATCCAAAGGATCGTCCGACAGCTCAAGAGGCACTATCTGATCCTTTCTTCAAGGGTTTGGCCAGAATTGAGAGAGAACCTTCTTCTCAGCCAATTTCAAGAATGGAGTTTGAGTTTGAGAGAAGGCGGGTGTCAAAAGACGACATTAAGGAACTAATATATCGAGAAATATTGGAATATCATCCACAGCTGCTTAAAGATTACAAAAATGGAACTGAAGGCACAAGCTTCATGTACCCTAGTGCAATAGACCAGTTCAGAAAGCAATTTGCTTATCTTGAAGAGAATAATGGTAAATGTAGCCCGGTGATTCCTCCAGCAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCTTTCTAGTACAATTCCTCCCAGTATGCAACCATTCAAAATTTCTAGAGCAGCAGAATCAAATTCTTTAAGCCAATCAAAGGGTTTACGACCTCCTCCAAGAGCGCCAGCAGCCAAACCAGGTAGAAGTATAGGGCCTGTTCACTGTGACAATGGGAGAAGCACAAAAGATAATTATGATGCAAGAATCTTCTACCAGAATACTGTTCCTCAATCAATCTCTCCACATCCTTTCCAAAGGGTTGTACAGGCACAACAAATTTACAAGGATAATTCACAAGGCAAACATCAACTCTCACCACAGAAGCGTAGCGTGCCACCCAGACCAGCTATCGATCTTAATACCAATCCATACCACCAGCAGGCCAAGAATGATCTTTTAAACAATCCTGTCACCGTTATTGACGCTAAATTGTTGCAAGCACAATCTCAATTTGGTGCAGCTGGTGCTGCAGCAGTAGCTGTTGCTGCTCACAGGCATTCTGCAGGCTTTCAATATGGAGTGTCATAG 1761 0.4117 MQKDQLKKDIKEVKFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGGKVAIKKIHDVFEHNCDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHQQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDTSTTTFWTDYVATRWYRAPELCGSFFAKYTPAIDIWSIGCIFAEVLTGKPLFPGKSIVHQLDLITDLLGTPPSEIIAGVRNEKARKYLMDMRKKLPVPFERKFPNADPLALRLLQRLLAFDPKDRPTAQEALSDPFFKGLARIEREPSSQPISRMEFEFERRRVSKDDIKELIYREILEYHPQLLKDYKNGTEGTSFMYPSAIDQFRKQFAYLEENNGKCSPVIPPARKHVSLPRSTVLSSTIPPSMQPFKISRAAESNSLSQSKGLRPPPRAPAAKPGRSIGPVHCDNGRSTKDNYDARIFYQNTVPQSISPHPFQRVVQAQQIYKDNSQGKHQLSPQKRSVPPRPAIDLNTNPYHQQAKNDLLNNPVTVIDAKLLQAQSQFGAAGAAAVAVAAHRHSAGFQYGVS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0185 586 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0185 586 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Psa1g0185 586 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0185 586 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Psa1g0185 586 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 445 - -
Psa1g0185 586 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0185 586 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 445 - -
Psa1g0185 586 MobiDBLite consensus disorder prediction 433 470 - -
Psa1g0185 586 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Psa1g0185 586 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Psa1g0185 586 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Psa1g0185 586 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0185 Psa-Chr1 10911055 10915672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0185 1 586 MAP Kinase Gene Family AT1G53510 68.167 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa1g0185 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0185 - K04371 gmx:100800878 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0185 1 10911055 10915672 Psa1g0185 1 10911055 10915672 ECH