Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0165 ATGCCGAATAGGATGTTGGATCACCAATCTGGCCAGGGATTTGTTTCAGATGGTAGCCACCTTGATGCGCTAGCAGAAATCAATGAGAAACATGAGAGAGTAAAAGATGAGTTTTCAAACAATTTAGAATTATGTGCAGGTGAAGCTGAAGAGTTTGTCGAACAACCTGTACTAGATTCAGACGCATTAGAACCATTCATAGACATGCAGTTCAACTCAAGGGAGGAAGCCAGAGAATTTTACAATGCCTATGGTAGGCGGATGGGATTTACAGTACGAGTACACCATAACCGACGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTTTGTTCGAAAGAAGGCTTTCGTGCAAAAAAGTATGTGCACAGAAAAGATAGAGTGCTTCCTCCTCCACCAGCCACCCGAGAAGGTTGTCAAGCCATGATAAGGCTGGCTTTACGGGATGAAGGGAAGTGGGTTGTCACCAAAGTTGTGAAGGAGCATACACATAAACTGATGAGTCCTAGTGAAGTTCCATGGCGAAGATCTGAGAAACATTTGGTTAGTGAGGATGAGAAAGATAGGAGAATCCGTGAGCTATCGCTTGAGCTGTACAACGAAAGGCAGAAGTACAAACGACGTTGTGCAGCGTATGAAGAACAGTTAAATATGATTCTGAACGATTTGGAAAAGCACACAGAACACATTTCTAAAAAAGTTGCTGATGTAGTCCGAAATATAAGAGAGATCGAGGAAGAAAAATCAGATTCAAAAGGCAGGTAA 771 0.4202 MPNRMLDHQSGQGFVSDGSHLDALAEINEKHERVKDEFSNNLELCAGEAEEFVEQPVLDSDALEPFIDMQFNSREEAREFYNAYGRRMGFTVRVHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDEGKWVVTKVVKEHTHKLMSPSEVPWRRSEKHLVSEDEKDRRIRELSLELYNERQKYKRRCAAYEEQLNMILNDLEKHTEHISKKVADVVRNIREIEEEKSDSKGR* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0165 256 Pfam FAR1 DNA-binding domain 79 169 IPR004330 -
Psa1g0165 256 Coils Coil 21 41 - -
Psa1g0165 256 Coils Coil 197 231 - -
Psa1g0165 256 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 6 255 - -
Psa1g0165 256 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0165 Psa-Chr1 10358682 10362811 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa1g0165 FAR1 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0165 - - gmx:100810283 412.535