Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0155 ATGACGTTTATGAATAACATTAGAAGCGCTACGAAAGAAGCGTTGGATCGCACAGCGATAATTGCAAAGTTCTTATGCTGTCTTCACTTCACCGCCAACTACCTCTGTTCCCCAACTCACGCGTATGGACCCAGTATGCTCCCTACCCTAAATATCGCTGGCGATGTTGTTCTTGTCGAGCACATATCTCCGCGGATTGGGAAAATTGGTCATGGTGACTTGGTTCTTGTTCGGTCACCTCTGAACCCTAATCGGAACTTGACAAAGCGCGTTGTTGCAATGGAAGGGGATACGGTTACTTTCTTTGATGCTTCCCATTCTGATTCCTCTCGAACTGCTGTGGTGTGTTTGCTTAATGGTGCCAAAGGGGCATGTTTGGATTCAAGGAGATAA 393 0.4656 MTFMNNIRSATKEALDRTAIIAKFLCCLHFTANYLCSPTHAYGPSMLPTLNIAGDVVLVEHISPRIGKIGHGDLVLVRSPLNPNRNLTKRVVAMEGDTVTFFDASHSDSSRTAVVCLLNGAKGACLDSRR* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0155 130 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 5 115 - -
Psa1g0155 130 Gene3D Umud Fragment, subunit A 32 129 - -
Psa1g0155 130 SUPERFAMILY LexA/Signal peptidase 34 102 IPR036286 -
Psa1g0155 130 CDD S26_SPase_I 43 97 IPR019533 GO:0004252|GO:0006465
Psa1g0155 130 Pfam Signal peptidase, peptidase S26 21 102 IPR019533 GO:0004252|GO:0006465
Psa1g0155 130 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 5 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0155 Psa-Chr1 10125623 10130877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0155 46 115 MADS-box Gene Family AT1G29960 49.296 4.13e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0155 K09647 - csv:101214382 146.362