Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0126 ATGGTTACGCAAATTTCTCTTCTGTTCTTCTTCACACTTCATCTATTAGTAACCGTTGTAATTTCGGCGAAATTGACTATAGTTAACCAGTGCAATTACACGGTGTGGCCAGCTTCATCAACTACCACTACCAGCGAAAACAGTGGAAACGTAACGCGCACCGGATTCATTTTAAAACCTGGTGAGAATTCCACAATCACGACCTCCGATAATTGGACAGGCCGTGTATGGGGCCGGACTCTCTGCACAACAGATTCCACCACCGGAAACTTCTCCTGCGTCACCGGCGATTGCAGCTCAGGAAAGATTACATGTGACAAATACGGATTGCCCCCCTTGACGCTGGCGGAGTTCGCTTTGAACAGTGCCAACAATCATGATTTTTACGATGTCAGCTTAGTTGACGGTTATAACGTTCCAATGAATATTGTTCCGTTAAGTAGTTCAGGAAAGTGTAGCAGCACGGGTTGTCCTACGGATCTGAACGCGGTGTGTCCGACGGAATTGAAGGTAATGAAAAATGGAAAACTTGTGGCGTGTCAGGGTCCTTGTGCTGCTTTTAATTTGCAGGTTTTCTGCTGTGCTGGGAGTCATTCAACTCCAAATACCTGTGAGCCGAGTGTGTATGCTCAGATATTCAAGACGGCGTGTCCTGCGGCCTATAGCTATGTCTATGATGATACAAGCGGCACATTCTCATGTCCGTCCACCGATTACCACGTCGTATTTTGTCCTGCTAATAACACCAGCTTAGATTCGGTAGATCAAGGTGGCAGTGTGAATGTTAGTGAGTCACTGGTTGCTGGTAGTGGACCAAATCGATGGCTCTCTTCTTCCGGAGATTTTGCATTTGGGTTTTACCAACTTCCTGATGAGCTTTTCTTACTAGCTATATGGTATGACAAAATACAAACTGATTCAATCATTTGGTATGCAAATGGAGACATTCCAGCTGCTAAAGGATCAAGACTGGTATTAAATGATTCTAGAGGTTTGGTGCTTACCAACCCTCAAGGTTTAGAGCTATGGAGATCATATTTCACATCGGGTACAGTTTCTAAAGGTATAATGAATGATGATGGAAACTTTCAATTGCAAGACAAAAACTCTGTGGCAATATGGGATAGTTTTAGTCATCCTACTGACACATTTGTGCCTAATCAAGTAATGGAATTAAATGGAAATCTTTCTTCACGACAAGGAGCATTCAACTTCTCAAGAGGAAGGTTCAAACTTCATTTACAAGAGGATGGGAATCTTGTGCTTCACCTTATAAATTTGCCGAGCAACTACAGTTACGATCCTTACTATAGTTCTGGTTCCAACGGTGATGTGAAGAATCAAACAAATGTTGGACAACGTTTGATGTTTGACAAATCAGGTTTCTTATACATAGAGAAAAAAGGTGGAGATAATATTTCTATCAGCAACCAGAATGGGACATTCTCAACTGATAACTTCTACTACAAGGCAACAATTAATTATGATGGAGTTTTCACCGTAGCATTTTACCCTAAAGATCCAAAAAGAGGGCAGAGTTGGGTCATTGCGAAGACGATACCAGAAAACATATGCTTGTATTCTACATTCACAGATGGTGAAGGTGTGTGTGGGTTTAATAGCATTTGCACCCTTACAAATGACCAAAGGCCAAATTGTACCTGCCCGGACGGATATTCTCTAATTGATTCAAACAGCATGTATGCTGGCTGCATACCAGATTTTCAAGTCATTTGTCAAGCAGGTGGGAACCTGGGTTCGCAAGATGATATGTATACAATGAAGGAATTGCCAAATACAGATTGGCCTAAATCTGATTATGAAATAATAAGTCCATCTAGTTTGCAAGAATGTAAGGAATCGTGTTTGCAAGATTGCTTATGTGTTTTGGTTTCTTTCAACCAAAGTTCTTGCTGGAAGAAGAAGCTCCCACTATCTTATGGAAGAAAAGATCAGGTAGTAAAAGGAGTTTCTGTCATGAAATTGATGAAAAATGATCCTTTTTCTTCCTTGACAAATCAGAAGAAAGATCACGAAACTTTGATTATTGTGATTTCAGTGCTTCTAGGAAGCTCTGTGTTTGTCATTTTGACATTACTTGGGGCCATGTTTTTTGGGTTTCCTTACAACCGCAAGAAGGTCAGAGGCTGTAGAACCAACAAAAATGCTGTTGACAATAACTTGCGCAATTTTAGCTTCAAGGAAATCGTTGAAGCAACAAATAACTTCAGAGAGGAACTTGGAAGAGGGTCTTGCAGCATTGTGTACAAAGGAACAATAGAGATGATGGTCAAGGTAGCAGTTAAGAAACTCGATAAGTTGCTTCAAGATAGTGATAAGGAATTTCAGACTGAAATGAGTGTGATAGGACAAACTCATCACAGAAACCTTGTTCGTCTTCTTGGATATTGCAATGAGGGACAACATCGGATTTTGGTATACGAGTTAATGAGCAATGGAACTTTAGCAAGCTTCCTTTTCACCTCTTTAAAACCAAATTGGAGCCAACGATTCCAAATTGTTCTCGGAATTGCAAGAGGTCTTGTTTACTTGCATGAGGGATGTTGCACCCAAATCATCCATTGTGATATTAAACCGCAAAATATACTTCTGGATGATCGATACAATGCTAGGATTTCAGATTTTGGATTAGCAAAGCTATTGCTGATTAACCAAAGCCACACCGAAACTGGAATCAGAGGAACCAAAGGGTATGTTGCGCCAGACTGGTTTAGGAGTGCACCAATCACTGCAAAGGTTGATACTTATAGTTTTGGTGTATTGTTATTAGAGATCATTTGTTGCAGGAAAAATGTAGAGAAGGAATTTTTTACTGAAGAACAAGGGGTTTTGACTGATTGGGCTTATGATTGCTACAAGACTAAAAGACTTGACAATCTTATAGAAAATGATAATGAGGTTGGAAATGACACGATGAGCTTGGAAAAGTTAGTCATGATTGCTATTTGGTGTATTCAAGAAGATCCTTCTCTTAGACCAACAATGAAGGAGGTTTTACTGATGTTAGAAGGAATTGTCGAAGTTATGGTACCCCGAAGTCCCTATCTTTATGGTTCTGTAAGTTGTAACTGA 3093 0.4028 MVTQISLLFFFTLHLLVTVVISAKLTIVNQCNYTVWPASSTTTTSENSGNVTRTGFILKPGENSTITTSDNWTGRVWGRTLCTTDSTTGNFSCVTGDCSSGKITCDKYGLPPLTLAEFALNSANNHDFYDVSLVDGYNVPMNIVPLSSSGKCSSTGCPTDLNAVCPTELKVMKNGKLVACQGPCAAFNLQVFCCAGSHSTPNTCEPSVYAQIFKTACPAAYSYVYDDTSGTFSCPSTDYHVVFCPANNTSLDSVDQGGSVNVSESLVAGSGPNRWLSSSGDFAFGFYQLPDELFLLAIWYDKIQTDSIIWYANGDIPAAKGSRLVLNDSRGLVLTNPQGLELWRSYFTSGTVSKGIMNDDGNFQLQDKNSVAIWDSFSHPTDTFVPNQVMELNGNLSSRQGAFNFSRGRFKLHLQEDGNLVLHLINLPSNYSYDPYYSSGSNGDVKNQTNVGQRLMFDKSGFLYIEKKGGDNISISNQNGTFSTDNFYYKATINYDGVFTVAFYPKDPKRGQSWVIAKTIPENICLYSTFTDGEGVCGFNSICTLTNDQRPNCTCPDGYSLIDSNSMYAGCIPDFQVICQAGGNLGSQDDMYTMKELPNTDWPKSDYEIISPSSLQECKESCLQDCLCVLVSFNQSSCWKKKLPLSYGRKDQVVKGVSVMKLMKNDPFSSLTNQKKDHETLIIVISVLLGSSVFVILTLLGAMFFGFPYNRKKVRGCRTNKNAVDNNLRNFSFKEIVEATNNFREELGRGSCSIVYKGTIEMMVKVAVKKLDKLLQDSDKEFQTEMSVIGQTHHRNLVRLLGYCNEGQHRILVYELMSNGTLASFLFTSLKPNWSQRFQIVLGIARGLVYLHEGCCTQIIHCDIKPQNILLDDRYNARISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSAPITAKVDTYSFGVLLLEIICCRKNVEKEFFTEEQGVLTDWAYDCYKTKRLDNLIENDNEVGNDTMSLEKLVMIAIWCIQEDPSLRPTMKEVLLMLEGIVEVMVPRSPYLYGSVSCN* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0126 1030 CDD TLP-PA 24 244 - -
Psa1g0126 1030 SMART blect_4 266 380 IPR001480 -
Psa1g0126 1030 Pfam Protein kinase domain 744 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0126 1030 SUPERFAMILY Osmotin, thaumatin-like protein 24 246 IPR037176 -
Psa1g0126 1030 Gene3D Phosphorylase Kinase; domain 1 708 816 - -
Psa1g0126 1030 SMART tha2 25 245 IPR001938 -
Psa1g0126 1030 Gene3D - 256 379 IPR036426 -
Psa1g0126 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 859 871 IPR008271 GO:0004672|GO:0006468
Psa1g0126 1030 Pfam D-mannose binding lectin 308 395 IPR001480 -
Psa1g0126 1030 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Psa1g0126 1030 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Psa1g0126 1030 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Psa1g0126 1030 PRINTS Pathogenesis-related protein signature 235 244 IPR001938 -
Psa1g0126 1030 SUPERFAMILY Protein kinase-like (PK-like) 726 1010 IPR011009 -
Psa1g0126 1030 Pfam Thaumatin family 29 245 IPR001938 -
Psa1g0126 1030 Gene3D Transferase(Phosphotransferase) domain 1 817 1018 - -
Psa1g0126 1030 CDD B_lectin 270 380 IPR001480 -
Psa1g0126 1030 ProSiteProfiles Thaumatin family profile. 22 245 IPR001938 -
Psa1g0126 1030 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 168 1030 - -
Psa1g0126 1030 Gene3D - 381 518 IPR036426 -
Psa1g0126 1030 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 168 1030 - -
Psa1g0126 1030 SUPERFAMILY alpha-D-mannose-specific plant lectins 294 441 IPR036426 -
Psa1g0126 1030 ProSiteProfiles Protein kinase domain profile. 741 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0126 1030 SMART serkin_6 741 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g0126 1030 ProSiteProfiles Bulb-type lectin domain profile. 251 378 IPR001480 -
Psa1g0126 1030 ProSitePatterns Thaumatin family signature. 89 105 IPR017949 -
Psa1g0126 1030 Gene3D Thaumatin 23 245 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0126 Psa-Chr1 7777876 7782196 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0126 727 1011 Receptor kinase-like Gene Family AT1G60800 43.493 1.82e-70 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa1g0126 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0126 - - mtr:MTR_2g067980 1734.15