Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0125 ATGGAAAAGCTCGAGCAAGTTCAATGCTTCGGCCGCAAGAAGAATGCTGTCGCCGTCACCTACTGCAAGCGCGGCCGTGGCTTAATCAAGATCAACGGCGCCCCCATCGAATTGGTCGAGCCGGAGATCCTCAGGTTCAAGGCCTTTGAACCAATCCTGTTGTTGGGAAAGAGCCGTTTCGCTGGAGTGGATATGCGAATCCGTGTCAAAGGCGGTGGTAAAACCTCTCAGATTTACGCCATCAGGCAGAGCATTGCCAAGGCGCTGGTTGCTTTCTACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAGATCAAGGATATTCTTGTTCGTTATGATAGGACTTTGCTTGTTGCTGATCCTAGGCGTTGTGAGCCAAAGAAGTTTGGTGGGCGAGGTGCTCGTGCAAGGTTCCAGAAATCTTACCGCTAG 432 0.5093 MEKLEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0125 143 Pfam Ribosomal protein S9/S16 11 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Psa1g0125 143 SUPERFAMILY Ribosomal protein S5 domain 2-like 6 143 IPR020568 -
Psa1g0125 143 PANTHER RIBOSOMAL PROTEIN S9 3 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Psa1g0125 143 PANTHER - 3 143 - -
Psa1g0125 143 Gene3D - 1 143 IPR014721 -
Psa1g0125 143 ProSitePatterns Ribosomal protein S9 signature. 71 89 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0125 Psa-Chr1 7735610 7736603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0125 5 143 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 87.770 5.05e-89 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0125 K02960 - gmx:100812117 272.322