Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g0123 | ATGTCTATAAGTTTGCATATGATTCGGCCAGGTCCAACAACATTGTTTTCGTTCTTGTTAGTGATCCTCCATCTATCAGCATCAGATCAATTGCGATTCATTCTACACAACGGATGCAACTATAAAGTGTGGCCAGCTTTATTTACTACCAGTGAAAATAGAAATTTTCAAACCATTAAACATGGTTTAGAACCGCATGATCCGAACACAATCACAACTCCTGATGCGTGGAATGGCTATTTATGGGGCCGAACTCTCTGCACAGGCACAGAAGGAAATTTCACATGTCTTACCGGCGACTGTGGTACCGCGAATGTGTCCTGCGATGAAAACGGAACCGTGCCGCGTGCTACCCTAGCCGAATTTCGTTATAGCTATGAAGGTGGAATTTACTTTTACAACATTAATGTGGTAGAAGGTTTCAACATTCCCATAGTAGTGACTCCTATAAGTGAAGCCAGCCAGAATTTGAATTGCATAAGTGCAGGATGCCCTATGAGTATAAATACTATTTGCTCTATAGAAACTTGTAAACCAAGTTCTTACTCTCCCACATTCAAGAAAGCATGTCCTCAGGCCTATAAGGATTCTTATGACAATGGGACAAACACATTTAGTTGTTCAACTAAGTCTTTCAAGATTATCTTTTGCCCAGCTTTCAGCACGGGATCATTGAATCAAAGTGTAAGTGTAGGTGACTCACTCATTGCTGGAAATGGACCAACTCGATGGATCTCTCCTTTAGAAGATTTTGCATTTGGGTTTTACCAACTTCCTAATGAACTTTTCTTACTAGCTATATGGTATCACAAAATACAAAACGATTCGATTATTTGGTATGCAAATGAAGGCAACCCAACTCCTAAGGGATCAAGATTGGTATTAAATAATTCTTATGGGTTGGTACTTACTAGCCCTAAAGGTTCAGAGCTATGGACATCATCAAATTTTACTTCTGGTAGAATTTCAAGAGGTCTAATGAAGAATGATGGAAATTTTCAATTACTAGACCAAAATTTTGTTGTATTATGGGAAAGTTACAATCATTTTACGGACACATTAGTTCCTGGTCAAGCAATGGATTTGAACACCCATCTTTATGCTCGACGAGGAGAAATCAACTTTTCACGAGGAAGATTTGAACTTTGCCTACAAGAAAGTGGGGATGTTGTGCTCAACCTTGTAAGTTTTCCTTCAAATGCAAACATTAATGCTCAATATGAGGCTTACTATGATAGTCGCACTATTGATCCGTATAAAAAATCAACAAATGTTGGTCAGAAATTTATATTTCACAAATATAATTTCTTCTTATACATATTGAAAAAGAACGGGTCAAGGTTTTCTATCATTGACAATCAAAATAAGACACTTTTAAATGATGACTTCTACTACAAAGCAACAATCAATTATGATGGAGTATTTACTCTGTCATATTACCCTAAAGATCAAAACAATGGTAATAGTTGGATTGTTGCAAAGACAATACCTGAGAACATTTGCTTGAGTTATAATTTTAACAATGGTCAAGGTGTTTGTGGAATGAATAGTATTTGCAACCTTAGACATGATCAAAGGCCAATGTGTACATGTCTAAAAGGTTATTCTCTAATTGATTCATACAACATGTATGGTGGTTGCAAAAAGGATTTGCCAGTCATTTGTCAAAGTAGGCATAATGGTTCACAAAAGAACACGCATATGATGATGAAACTGTCCAACGTTTCTTGGCCTAAATCTGATTATGAAACATGCAATTCTTGTACTCTTGAAGAATGCAAGGATTATTGTTTGCAAGATTGCTTATGTGTGTTGGCTTTTTTTAATGAAAGTTCTTGTTGGAAGAATAACCTACCACTCTTACATGGGAGAAAAGAGTTGGCGGTAAAAGGAATTTATATCCTAAAAGTAAATAAAACTAATACTCCATCGTCCCTCTCCGATGGGATAAAAGATCTAGATAATAGTATAACCAAAAAGAAAAAAGATCATAAAACTTTGATTATTGTGATATTAGTTATTATTGGAATATCTATTTTTATGACTTTAAGTTTTGTTGGTGCAATATTTTATTGGCGCAACCATAACAAGATTGAAAGTAGTGTATCAAACACAAGTGTCATTGACAAAAATTTGAGAGTTTTTACCTTTAAGGAAATTACAGAAATAACAAACAACTTTAGAGAAGAATTAGGAAGAGGTTCTTGTAGCATTGTATACAAAGGAACAATAGATTCAGATATTTGTGTGGCTGTTAAAAAACTAGATAAGTTGTTCCAAGATAGTGATAAAGAATTTCAAAATGAAATGGATGTGATAATTGAAACTCATCATAGAAACCTTGTTCGTCTTCATGGATATTGCAGTGAGGAACAACACAGAATTTTGGTGTATGAGTTAATGAGTAATGGTACTCTAGCAAGCTTCCTTTTCACCCCTTTGAAACCAAGTTGGAACCAACGAGTTTGGATTATCATTGGGATTGCTAGGGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATTATCCATTGTGACATAAAGCCACAAAACATACTTCTTGATGATGATTACAATGCTAAGATTTCCGACTTTGGGTTAGCAAAACTATTATTGATTAATCAAAGTCACACAAAAACTGGAATTAGAGGAACCAAAGGTTATGTTGCACCAGATTGGTTTAGGAGTGCACCGATCACTGTTAAAGTTGATGTTTATAGTTTTGGTGTGTTGTTACTAGAGATTATATGTTGTAGGAAAAATGTAGAGGATGATAATGTTAGTGAAGAAAAAAGGATTTTAATTGATTGGGGATATGATTGCTACAAGGCTGGAAAAATGGACATTCTTCTAGAAAGTGAATATGAGGTAGTAAATGATACGAGTAGATTGGAAAAATTTGTCATGATTTCTATTTGGTGCACTCAAGAAGATCCATCTCTAAGGCCACCAATGAAGAAGGTTTTGTTAATGCTAGAAGGGATCGTTGAAGTTGAAATTCCTCCAAGTCCATACTTGTATGGTTCTTCTAATTAA | 3039 | 0.3527 | MSISLHMIRPGPTTLFSFLLVILHLSASDQLRFILHNGCNYKVWPALFTTSENRNFQTIKHGLEPHDPNTITTPDAWNGYLWGRTLCTGTEGNFTCLTGDCGTANVSCDENGTVPRATLAEFRYSYEGGIYFYNINVVEGFNIPIVVTPISEASQNLNCISAGCPMSINTICSIETCKPSSYSPTFKKACPQAYKDSYDNGTNTFSCSTKSFKIIFCPAFSTGSLNQSVSVGDSLIAGNGPTRWISPLEDFAFGFYQLPNELFLLAIWYHKIQNDSIIWYANEGNPTPKGSRLVLNNSYGLVLTSPKGSELWTSSNFTSGRISRGLMKNDGNFQLLDQNFVVLWESYNHFTDTLVPGQAMDLNTHLYARRGEINFSRGRFELCLQESGDVVLNLVSFPSNANINAQYEAYYDSRTIDPYKKSTNVGQKFIFHKYNFFLYILKKNGSRFSIIDNQNKTLLNDDFYYKATINYDGVFTLSYYPKDQNNGNSWIVAKTIPENICLSYNFNNGQGVCGMNSICNLRHDQRPMCTCLKGYSLIDSYNMYGGCKKDLPVICQSRHNGSQKNTHMMMKLSNVSWPKSDYETCNSCTLEECKDYCLQDCLCVLAFFNESSCWKNNLPLLHGRKELAVKGIYILKVNKTNTPSSLSDGIKDLDNSITKKKKDHKTLIIVILVIIGISIFMTLSFVGAIFYWRNHNKIESSVSNTSVIDKNLRVFTFKEITEITNNFREELGRGSCSIVYKGTIDSDICVAVKKLDKLFQDSDKEFQNEMDVIIETHHRNLVRLHGYCSEEQHRILVYELMSNGTLASFLFTPLKPSWNQRVWIIIGIARGLVYLHEECCTQIIHCDIKPQNILLDDDYNAKISDFGLAKLLLINQSHTKTGIRGTKGYVAPDWFRSAPITVKVDVYSFGVLLLEIICCRKNVEDDNVSEEKRILIDWGYDCYKAGKMDILLESEYEVVNDTSRLEKFVMISIWCTQEDPSLRPPMKKVLLMLEGIVEVEIPPSPYLYGSSN* | 1013 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g0123 | 1012 | SMART | tha2 | 33 | 218 | IPR001938 | - | |
Psa1g0123 | 1012 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 142 | 1011 | - | - | |
Psa1g0123 | 1012 | SUPERFAMILY | Osmotin, thaumatin-like protein | 32 | 218 | IPR037176 | - | |
Psa1g0123 | 1012 | SMART | serkin_6 | 725 | 993 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g0123 | 1012 | PANTHER | MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN | 142 | 1011 | - | - | |
Psa1g0123 | 1012 | Pfam | Thaumatin family | 37 | 173 | IPR001938 | - | |
Psa1g0123 | 1012 | Pfam | Thaumatin family | 175 | 218 | IPR001938 | - | |
Psa1g0123 | 1012 | SMART | blect_4 | 226 | 350 | IPR001480 | - | |
Psa1g0123 | 1012 | CDD | STKc_IRAK | 731 | 996 | - | - | |
Psa1g0123 | 1012 | Gene3D | Thaumatin | 31 | 219 | IPR037176 | - | |
Psa1g0123 | 1012 | Pfam | S-locus glycoprotein domain | 460 | 536 | IPR000858 | GO:0048544 | |
Psa1g0123 | 1012 | ProSiteProfiles | Protein kinase domain profile. | 725 | 1007 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g0123 | 1012 | Pfam | D-mannose binding lectin | 277 | 364 | IPR001480 | - | |
Psa1g0123 | 1012 | Pfam | Protein kinase domain | 728 | 990 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g0123 | 1012 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 843 | 855 | IPR008271 | GO:0004672|GO:0006468 | |
Psa1g0123 | 1012 | PRINTS | Pathogenesis-related protein signature | 32 | 44 | IPR001938 | - | |
Psa1g0123 | 1012 | PRINTS | Pathogenesis-related protein signature | 80 | 91 | IPR001938 | - | |
Psa1g0123 | 1012 | PRINTS | Pathogenesis-related protein signature | 131 | 147 | IPR001938 | - | |
Psa1g0123 | 1012 | PRINTS | Pathogenesis-related protein signature | 208 | 217 | IPR001938 | - | |
Psa1g0123 | 1012 | ProSiteProfiles | Thaumatin family profile. | 33 | 218 | IPR001938 | - | |
Psa1g0123 | 1012 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 263 | 393 | IPR036426 | - | |
Psa1g0123 | 1012 | Gene3D | Phosphorylase Kinase; domain 1 | 689 | 800 | - | - | |
Psa1g0123 | 1012 | ProSiteProfiles | Bulb-type lectin domain profile. | 220 | 348 | IPR001480 | - | |
Psa1g0123 | 1012 | Gene3D | Transferase(Phosphotransferase) domain 1 | 801 | 1001 | - | - | |
Psa1g0123 | 1012 | Gene3D | - | 224 | 350 | IPR036426 | - | |
Psa1g0123 | 1012 | SUPERFAMILY | Protein kinase-like (PK-like) | 711 | 1005 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g0123 | Psa-Chr1 | 7716139 | 7722508 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g0123 | 711 | 995 | Receptor kinase-like Gene Family | AT1G60800 | 43.151 | 3.25e-70 | 243 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Psa1g0123 | Pkinase | 2.6e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g0123 | - | - | mtr:MTR_2g067980 | 1214.13 |