Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0086 ATGGCGTCGAACAAGATCGAACGGGGTCACCAGATGTACCGTGACGGACTCTACAAAGAGGCGTTAGGGTTCTACACCGAAGCCATCGCTATGGCGAAGACGAATCCACAGAAGATCGCCTTGCATAGTAATCGTGCTGCTTGTTTTCTTAAACTTCATGATTTCAAGAAGGCAGCAGAAGAATGTACCTCGGTGCTTGAGCTTGATAGCAATCACAGTGGAGCATTGATGTTGCGGGCTCAAACATTGGTGACCCTGAAGGAGTACCATTCTGCACTTTTTGATGTCAACAGACTCTTGGAGTTGAATCCATCCTCCGAGGTCTATCAAAACCTTTATGCACGCTTGAAGACACAGTTGTCACTTGCTCCAATACCTGAGTCAGAAGAGGAGTTTGAAGAACAGGAAGATGAGAAGGCTGAGGTGATGCTAAAAGGTGAGCAAAAGAAGGAAGAAATAGGACAGAAATATGCGGCAACTTCTAATGTTAGGATAGATCAAAAGGTTGAGCTTGGCAAAGGTGTAATTAGTATTGAATGTACCCCTAAAGAAACAGACCCCAAGTTTTCATCCAAACAGGAAAGAGACCAAAAGTATGAGCCTAAACAGTCAACAGAAGAGCTTAAAATTCCGAGAGCACTAAACAACGAATCAGCAGAGCAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTGGACTATGCACGGTGGGACAGTGTTGACAATGATTCTAGCGAAGATGATGAAGATGACGATGATGAATCTTTTCCCCAGTACCGTTTTCGTGTTAAAACAATTGGTGTACGTCCTGTGAAATGA 828 0.4384 MASNKIERGHQMYRDGLYKEALGFYTEAIAMAKTNPQKIALHSNRAACFLKLHDFKKAAEECTSVLELDSNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLYARLKTQLSLAPIPESEEEFEEQEDEKAEVMLKGEQKKEEIGQKYAATSNVRIDQKVELGKGVISIECTPKETDPKFSSKQERDQKYEPKQSTEELKIPRALNNESAEQGWQTIPKPKGHSALDYARWDSVDNDSSEDDEDDDDESFPQYRFRVKTIGVRPVK* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0086 275 Pfam Anaphase-promoting complex, cyclosome, subunit 3 16 93 - -
Psa1g0086 275 Coils Coil 125 152 - -
Psa1g0086 275 MobiDBLite consensus disorder prediction 185 207 - -
Psa1g0086 275 MobiDBLite consensus disorder prediction 182 261 - -
Psa1g0086 275 SUPERFAMILY TPR-like 6 120 IPR011990 GO:0005515
Psa1g0086 275 Gene3D Tetratricopeptide repeat domain 1 122 IPR011990 GO:0005515
Psa1g0086 275 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 275 - -
Psa1g0086 275 SMART tpr_5 39 72 IPR019734 GO:0005515
Psa1g0086 275 SMART tpr_5 2 35 IPR019734 GO:0005515
Psa1g0086 275 SMART tpr_5 73 106 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0086 2 120 Calmodulin-binding Proteins AT3G25230 34.351 1.63e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0086 - - gmx:100792046 402.134