Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0075 ATGCAAAGTTGGAATAGTGTACCAAACTTGAGAGACCACTCTGAATTTGAACAAGCATTTTTATTACCTCCTAACAATAAAATGAGTGGTAGTAGTAGTAGTAATAGATATGATGAAATAGGTGAATTATGTATAGATGGATTAGTATCAGGAATGGGCGGAATGAGGCTAAATCAACGTACATATTCAGATAGTTTGTTATCTGAGGCGGTGCAGCAGCAGCAGGATGTACCTTATTGGTTGAAAGATCTCCTTGACGATGATGATGACGAGCCTGTAGAAGAAAAACCTCCTAGCAGGACTCATAGAAGATCATCAAGTGACTCAATAGCATACTTACATGATAAAAGTATACTTCTTCAAGATCCTGATAGGAAGGAACGGAATATTAATGTAACAAACCCACAACTCTCCTTTCTGCACCAACAACTTCCTAGAATTGATCCTTCAAAACGTGTCAGAAGGCATTCAGCTCAACAGTACCGGGCGAGGAAAGTTCAATACATTGGAGAACTAGAAAGAAGTGTTCAATCTTTACAGGCAGAAGGATATGAAGTTTCAGCAGAGCTTGAATTTCTTGATCAGCAAAACCTGATATTAGGTATGGAGAACAGGGCCCTCAAACAACGCTTGGACAGTTTATCTCAAGAGCACTTCATTAAATGCTTGGAGCAGGAAGTGCTTGAGAAAGAAATCTCAAGGCTTAGAAATCTTTATCAACAACAACAACAACACAGGCAGCAGCAGCAGCAGCAAAAACACAATGGTAGAAATCGATCTAAACGTCAAGATATCGATTCGTCAATTGCCAAACTCCCTTTCAAGAATAAGGGAACTGAGTCATCACAGAAAGCCATATAG 861 0.3937 MQSWNSVPNLRDHSEFEQAFLLPPNNKMSGSSSSNRYDEIGELCIDGLVSGMGGMRLNQRTYSDSLLSEAVQQQQDVPYWLKDLLDDDDDEPVEEKPPSRTHRRSSSDSIAYLHDKSILLQDPDRKERNINVTNPQLSFLHQQLPRIDPSKRVRRHSAQQYRARKVQYIGELERSVQSLQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFIKCLEQEVLEKEISRLRNLYQQQQQHRQQQQQQKHNGRNRSKRQDIDSSIAKLPFKNKGTESSQKAI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0075 286 MobiDBLite consensus disorder prediction 89 108 - -
Psa1g0075 286 MobiDBLite consensus disorder prediction 239 254 - -
Psa1g0075 286 MobiDBLite consensus disorder prediction 239 286 - -
Psa1g0075 286 PANTHER - 59 118 - -
Psa1g0075 286 PANTHER - 146 274 - -
Psa1g0075 286 CDD bZIP_plant_RF2 154 197 IPR044759 GO:0003700|GO:0006355
Psa1g0075 286 Coils Coil 225 252 - -
Psa1g0075 286 SUPERFAMILY Leucine zipper domain 154 205 IPR046347 GO:0003700|GO:0006355
Psa1g0075 286 SMART brlzneu 148 206 IPR004827 GO:0003700|GO:0006355
Psa1g0075 286 MobiDBLite consensus disorder prediction 94 108 - -
Psa1g0075 286 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 146 274 IPR044797 -
Psa1g0075 286 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 59 118 IPR044797 -
Psa1g0075 286 Gene3D - 149 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0075 Psa-Chr1 4663461 4664680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0075 147 221 bZIP Transcription Factor Family AT2G42380 53.750 2.09e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0075 - - mtr:MTR_3g005230 254.603