Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0059 ATGGCGTCCGAAAATTCCAAACCAGAGGTCTCGTTAGAGAGTTCAAAGGTAGAAACAATAAGCAAAGCTGTAGATTCTCTTCTCAAATGGCACAAATCGCGTTTAGAAACCGAAAAACCTAAACTTTTCGAAGAAGAAGAATTCATCTATCTGGTATTAACCCTAAAGAAGATTCCTACAAATGGCCGTGTTAACCCTCACAAGATTCCCATCCCTCACTCCCTTCTCTCTCCGTCATCGGAGCAATGTCTCATCATCGACGACAGAGCCAACAAGCCTGCTCGTCTCACCAAAGATGAAGCTCAGAAGAAGATTCAATCGGAGTCGATTCCTATCGCGAAGGTTCTCAAGCTCTCGAAGCTTACTACGGATTATCGTCCGTTTGAGGCGAAGCGTAAGCTGTGTAATTCGTATGATCTGTTTTTTGCTGATAAAACTATTGTGCCGTTGCTGCCGCGTTTGCTTGGGAAGCAGTTTTTTAAGAAGAGGAAGCTTCCGGTGCAGGTTGATTTGAAGAAGAAGAATTGGAAGGAGCAGATTGAGAGAGCGTGTTCTTCTGCGCTATTGTTTTTGAGGACTGGGACCTGTAGTGTTCTGAAAGTGGCGAAGTTGAGTATGGAGAGGGATGAGATTGTTGAGAATGTGGTTGCTGCTATGGAGGGGGTTGTGGAGGTTTTTCCGAAAAAATGGGGGGTTGTTAGGTCTTTTCATGTTAAGTTGTTGGAGTCTGTTGCGTTGCCGGTTTATCAGGCTGTTCCTGATGTTAGGTTGAAGATTGAGGGGGTTAGGGATTTGGAGGCTGCTTTGGAGAAGGATGAGAAGAAGGTTCGTGATGGGAAAGACGGGAAGAAGAGTAAGAAGGGGAGGATTCATGAAATTAAGTATATGGATGATAGAATGAGTGAGGATGGTGATGTTCGTAGTGATGTCGATGTTGATGATATTGATGATGGTGAAGTTGGTGGTGGTGATAATGTAGATGATGATCACGAAAAGGGTGAAATTGAGAGTGGAGCTCTGGGGAGTAAGAAGAGGAAGAAAGGAGTTAAAGGGAAGAAAGAGGCTTTGAGTGAGTCGGGCAGTGTGAAATCGTTGAAGGGTTCTGCTAAGAGGAAAAAGAAAGATGTGTTGGTGACTCTGAATGCTGCGGAAGAAGAAGGTTCCATCAAGAAGGGTAGTGAAAAGAGAAAGAAATTGTCTGCGAAAGACGAGGGTTCAGACAAGAAGAAGAAAAAAGGGTCGGTTGAGGATAAAGCTGCTACTGAAGACTTGATCAAGAAGAGTGAGGATAAGGTATCAATTGAGGATGCGGGTTCGGACAAGAAGAAGAAAAGAGGGTTGGCTGTGAATGCTGCCACCGAAGATTTGATCAAGAAGAGCAAGGATAAATTATTCACCGAGGATGCTGGTTCTGACAAGAAGAAGACAAGGAGAGCCGATGTGAAGGTAAAGGGTAGGAAAAGTAAGAATGCTGTATGA 1479 0.4415 MASENSKPEVSLESSKVETISKAVDSLLKWHKSRLETEKPKLFEEEEFIYLVLTLKKIPTNGRVNPHKIPIPHSLLSPSSEQCLIIDDRANKPARLTKDEAQKKIQSESIPIAKVLKLSKLTTDYRPFEAKRKLCNSYDLFFADKTIVPLLPRLLGKQFFKKRKLPVQVDLKKKNWKEQIERACSSALLFLRTGTCSVLKVAKLSMERDEIVENVVAAMEGVVEVFPKKWGVVRSFHVKLLESVALPVYQAVPDVRLKIEGVRDLEAALEKDEKKVRDGKDGKKSKKGRIHEIKYMDDRMSEDGDVRSDVDVDDIDDGEVGGGDNVDDDHEKGEIESGALGSKKRKKGVKGKKEALSESGSVKSLKGSAKRKKKDVLVTLNAAEEEGSIKKGSEKRKKLSAKDEGSDKKKKKGSVEDKAATEDLIKKSEDKVSIEDAGSDKKKKRGLAVNAATEDLIKKSKDKLFTEDAGSDKKKTRRADVKVKGRKSKNAV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0059 492 MobiDBLite consensus disorder prediction 273 492 - -
Psa1g0059 492 MobiDBLite consensus disorder prediction 273 306 - -
Psa1g0059 492 SUPERFAMILY Ribosomal protein L1 20 249 IPR023674 -
Psa1g0059 492 MobiDBLite consensus disorder prediction 307 324 - -
Psa1g0059 492 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 16 306 - -
Psa1g0059 492 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 16 306 - -
Psa1g0059 492 Gene3D - 92 186 IPR016095 -
Psa1g0059 492 CDD Ribosomal_L1 20 248 IPR028364 -
Psa1g0059 492 Pfam Ribosomal protein L1p/L10e family 38 244 IPR028364 -
Psa1g0059 492 MobiDBLite consensus disorder prediction 387 478 - -
Psa1g0059 492 MobiDBLite consensus disorder prediction 325 343 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0059 137 239 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 27.184 2.93e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0059 K14775 - gmx:100782862 401.364