Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0036 ATGGCATATAGTGGCATCAATTTGGTGTTTCATCATGGCTCAATGTTCCATCACGAATCTACAACTTCTTTAGCCAAACCCGTCAGACTATGCGCAAGCTCTCATTTGCTTTCTGCAACCTGCCCTGTCACAAGTGCCTGTAAACCCCTCTGTCGGCGGTGCAGCTGCAAAACGAAACGGCTTGTTGTAAGGTGTTGTTCAATCAGTGAGTTTGTTGTTTCTAGTGATGCAAATTACGGCAATAAGCAGGTTATTAGTCTCACGCCTCGTCTTTATGATTATTTGCTCAAAAATGTTCGAGAACCAGAGATTCTAAGGCAACTGCGAGTGGAGACGGCATCTATGCGTGGAAGTCAGATGCAGGTGTCTCCTGATCAGGCACAGCTACTTGCAATGCTCGTGCAGATTCTTGGAGCGGAAAGGTGTATTGAAGTCGGTGTTTATACTGGTTACTCATCACTAGCCATAGCATTAGTCCTGCCAGAATCAGGTCGTTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGATGTTGCTAAGAAGTATTATCAACTTGCTGGTGTTTCACATAAGGTTGATGTAAAACTTGGACTTGCAGCGGATTCCCTAGAATCTCTAATTATGAATGGTGAAGTAGGAAGCTATGACTTTGCATTTATTGATGCTGAGAAAAGGATGACTGCGAAATATTTTGAGATGCTACTACAACTAGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGTTGATCCATTGGTAAGTGACTCTAAAACTAACAGCATTAGAAATTTTAATCAACGGTTAATCGGAGACAAGCGTGTAAGCATCAGTATGGTGCCTATTGGAGATGGGATGACAATCTGTCGGAAAATTCAGAATTATATATCTTAA 912 0.4178 MAYSGINLVFHHGSMFHHESTTSLAKPVRLCASSHLLSATCPVTSACKPLCRRCSCKTKRLVVRCCSISEFVVSSDANYGNKQVISLTPRLYDYLLKNVREPEILRQLRVETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKSLDVAKKYYQLAGVSHKVDVKLGLAADSLESLIMNGEVGSYDFAFIDAEKRMTAKYFEMLLQLVRVGGLIVIDNVLWHGKVVDPLVSDSKTNSIRNFNQRLIGDKRVSISMVPIGDGMTICRKIQNYIS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0036 303 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 81 298 IPR002935 GO:0008171
Psa1g0036 303 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 70 297 - -
Psa1g0036 303 Gene3D Vaccinia Virus protein VP39 74 297 IPR029063 -
Psa1g0036 303 CDD AdoMet_MTases 141 246 - -
Psa1g0036 303 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 98 297 IPR029063 -
Psa1g0036 303 Pfam O-methyltransferase 99 298 IPR002935 GO:0008171
Psa1g0036 303 PANTHER O-METHYLTRANSFERASE-RELATED 70 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0036 Psa-Chr1 2359010 2363149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0036 55 286 Monolignol Biosynthesis Gene Families AT3G62000 74.894 2.43e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0036 - - lja:Lj3g3v1048910.1 446.817