LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prciun49133g0061	GTGACACGTTCACTAAAAAAAAATCCTTTTGTAGCGAATCATTTATTAAGAAAAATAAAGAAACTTAACACAAAAGCAGAAAAAGAAATAATAGTAACTTGGTCCAGAGCATCTACCATTATACCCACAATGATCGGTCATACGATTGCTATCCATAATGGAAAAGAACATTTACCTATTTATATAACAGATCGTATGGTAGGACATAAATTGGGAGAATTTTCACCTACTATAAACTTCCGGGGACATGCAAAAAATGATAATAGATCTCGTCGTTAA	279	0.3226	MTRSLKKNPFVANHLLRKIKKLNTKAEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTINFRGHAKNDNRSRR	92

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prciun49133g0061	92	Hamap	30S ribosomal protein S19 [rpsS].	1	89	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Prciun49133g0061	92	PIRSF	RPS19p_RPS19a_RPS15e_RPS19o	1	92	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Prciun49133g0061	92	SUPERFAMILY	Ribosomal protein S19	3	85	IPR023575	GO:0003735\|GO:0005840\|GO:0006412
	Prciun49133g0061	92	PANTHER	RIBOSOMAL PROTEIN S19P FAMILY MEMBER	2	86	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Prciun49133g0061	92	ProSitePatterns	Ribosomal protein S19 signature.	53	77	IPR020934	GO:0003723
	Prciun49133g0061	92	NCBIfam	30S ribosomal protein S19	1	92	IPR005732	GO:0003735\|GO:0006412\|GO:0015935
	Prciun49133g0061	92	PRINTS	Ribosomal protein S19 family signature	33	52	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Prciun49133g0061	92	PRINTS	Ribosomal protein S19 family signature	53	65	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Prciun49133g0061	92	PRINTS	Ribosomal protein S19 family signature	65	80	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Prciun49133g0061	92	FunFam	30S ribosomal protein S19	1	92	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prciun49133g0061	3	78	Cytoplasmic Ribosomal Protein Gene Family	AT5G63070	40.506	4.05e-12	56.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prciun49133g0061	K02965		-	egr:9829699	186.808

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