Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prciun49133g0061 GTGACACGTTCACTAAAAAAAAATCCTTTTGTAGCGAATCATTTATTAAGAAAAATAAAGAAACTTAACACAAAAGCAGAAAAAGAAATAATAGTAACTTGGTCCAGAGCATCTACCATTATACCCACAATGATCGGTCATACGATTGCTATCCATAATGGAAAAGAACATTTACCTATTTATATAACAGATCGTATGGTAGGACATAAATTGGGAGAATTTTCACCTACTATAAACTTCCGGGGACATGCAAAAAATGATAATAGATCTCGTCGTTAA 279 0.3226 MTRSLKKNPFVANHLLRKIKKLNTKAEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTINFRGHAKNDNRSRR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prciun49133g0061 92 Hamap 30S ribosomal protein S19 [rpsS]. 1 89 IPR002222 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 1 92 IPR002222 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 SUPERFAMILY Ribosomal protein S19 3 85 IPR023575 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 2 86 IPR002222 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 ProSitePatterns Ribosomal protein S19 signature. 53 77 IPR020934 GO:0003723
Prciun49133g0061 92 NCBIfam 30S ribosomal protein S19 1 92 IPR005732 GO:0003735|GO:0006412|GO:0015935
Prciun49133g0061 92 PRINTS Ribosomal protein S19 family signature 33 52 IPR002222 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 PRINTS Ribosomal protein S19 family signature 53 65 IPR002222 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 PRINTS Ribosomal protein S19 family signature 65 80 IPR002222 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 FunFam 30S ribosomal protein S19 1 92 - -
Prciun49133g0061 92 Gene3D 30s Ribosomal Protein S19; Chain A 1 92 IPR023575 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0061 92 Pfam Ribosomal protein S19 3 83 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prciun49133g0061 3 78 Cytoplasmic Ribosomal Protein Gene Family AT5G63070 40.506 4.05e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prciun49133g0061 K02965 - egr:9829699 186.808