Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prciun49133g0057 ATGGGTAAGGACACCATTGCTGACATAATAACCTCTATACGAAATGCTGACATGAATAGAAAAGGGACGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTACAATACTTTTTCGAGAAGGTTTTATTGAAAACGTGAGAAAACATAGGGAAAGCAACAAATATTTTTTAGTTTTAACTCTACGGCATAGAAGAAATAGGAAAGGGTCATATAAAACTATTTTGAATTTAAAACGAATCAGTAGACCTGGTCTACGAATCTATTCTAATTATCAACGAATTCCTAGAATTTTAGGAGGGATGGGCATTGTAATTCTTTCTACTTCTCGAGGTATAATGACAGATCGAGAGGCTCGATTAGAAAGAATCGGCGGAGAAATTTTATGTTATATATGGTAA 405 0.3432 MGKDTIADIITSIRNADMNRKGTVRIPSTNITENIVTILFREGFIENVRKHRESNKYFLVLTLRHRRNRKGSYKTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLERIGGEILCYIW 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prciun49133g0057 134 FunFam 30S ribosomal protein S8 77 134 - -
Prciun49133g0057 134 SUPERFAMILY Ribosomal protein S8 1 134 IPR035987 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0057 134 Hamap 30S ribosomal protein S8 [rpsH]. 1 134 IPR000630 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0057 134 Gene3D - 77 134 - -
Prciun49133g0057 134 Gene3D - 1 76 - -
Prciun49133g0057 134 FunFam 30S ribosomal protein S8, chloroplastic 1 73 - -
Prciun49133g0057 134 PANTHER 40S RIBOSOMAL PROTEIN S15A 4 132 IPR000630 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0057 134 Pfam Ribosomal protein S8 4 134 IPR000630 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0057 134 ProSitePatterns Ribosomal protein S8 signature. 104 121 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prciun49133g0057 8 134 Cytoplasmic Ribosomal Protein Gene Family AT2G39590 29.323 3.61e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prciun49133g0057 K02994 - cave:30215248 253.832