Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prciun49133g0055 ATGGGAAAACCTATACCAAAAATTGGTTCACGTAGAAATGTACGTATTGGTTCACGTAAGAATGCGCGTAAAATACCAAAGGGAGTTATTCATGTTCAAGCTAGTTTTAACAATACCATTGTGACTATTACAGATGTACGGGGTCAGGTGATTTCTTGGTCTTCCGCCGGTACTTGTGGATTCAAGGGTACAAGAAGGGGGACACCTTTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGGACAGTAGCGGATCAAGGTATGCAACGAGCAGAAGTCATGATAAAAGGTGCCGGTCTCGGAAGAGATGCGGCATTAAGAGCTATTCGTAGAAGTGGTATACTATTAAGTTTCATACGGGATGTAACCCCTATGCCACATAATGGATGTAGGCCCCCTAAAAAAAGACGTGTGTAA 417 0.4365 MGKPIPKIGSRRNVRIGSRKNARKIPKGVIHVQASFNNTIVTITDVRGQVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVMIKGAGLGRDAALRAIRRSGILLSFIRDVTPMPHNGCRPPKKRRV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prciun49133g0055 138 Pfam Ribosomal protein S11 28 137 IPR001971 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0055 138 SUPERFAMILY Translational machinery components 23 138 - -
Prciun49133g0055 138 NCBIfam 30S ribosomal protein S11 19 135 IPR019981 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0055 138 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 20 136 IPR001971 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0055 138 Gene3D Ribosomal protein S11 9 138 IPR036967 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0055 138 Hamap 30S ribosomal protein S11 [rpsK]. 11 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0055 138 ProSitePatterns Ribosomal protein S11 signature. 106 128 IPR018102 -
Prciun49133g0055 138 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 7 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Prciun49133g0055 138 FunFam 30S ribosomal protein S11, chloroplastic 11 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prciun49133g0055 28 128 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 34.545 3.74e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prciun49133g0055 K02948 - fve:10251554 259.225