Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g2418 ATGGAAGTTCTGGAGAAAATGAGAGATGAGAAGAGAAATGATGTGATTTGGCAAGGCAGATGCTCTGGTACAGTCTACATCGGAGGAAGTGAATTTGATGCACACTTTTCTTTGATAAATGAGGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTTCAAAGTGTTGCACACTTTGAGGCAGAAGTGGTTGCAATGACCGCTGCACTTCTTGGAGGCAAAGAAAAGAGTTCAGGGGGACAAATTTGTGGAAATATGACATCGGGAGGGACTGAAAGTATATTATTAGCTGTCAAATCATCACGCGACTATATGAAGTTTAAAAAAGGAATTACAATACCTGAAATGATAATACCTGAGTCTGCACACTCAGCATATGACAAAGCTGCTCAATATTTTAACATCAAACTCTGGCGCATCCCTGTTAACAAAAGATTTCAGGCAGATCCAAAAGCAATTCGACATCATATTAACAAAAATACCATCTTGATTGTTGGTTCTGCCCCTGGATTTCCTCATGGAATAATTGACCCCATTGAAGAACTTGGTAACCTGGCATCAAGCTTCGGAATTTGCTTTCATGTTGACCTCTGTCTTGGTGGCTTTGTATTACCTTTTGCTCGCAAGCTTGGGTACTCCATTCCACCTTTTGACTTTTCTGTTAAAGGAGTTTCTTCAATATCAGTGGACGTGCATAAATATGGTTTAGCTCCTAAAGGAACGAGTATAGTACTATACAGGAACCACGACATCAGAAAGCATCAATTTGTTGCTGTTACTGAGTGGTCTGGTGGGTTGTATGTTTCTCCAACCATGGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGAGCTTGGGCAGCAATGATGTCCTTAGGAGAAGAAGGTTACCTGGAGAATACAAAAGCAATTATGGATGTTTCGAAAAGAATACAGGAAGGTGTTTCCGGTGTGTGCAGCATAGGTGAGATTCCAGAATTATTCATCGTTGGAAGACCGGATATGACAATTGTGGCTTTTGGATCTGACGTTCTAGACATATTTGAAGTCAATGATATCATGTCATCCAGAGGGTGGCACTTGAATGCATTGCAGAGACCAAACAGCATTCATATCTGTGTGACACTGCAGCATTTGGCGGTTGTTGAAGACTTCCTCAGGGACTTGAAGGACTCTGTGATGACCGTAAAAGAAAATCCTGGTCCAGTAAGTGGAGGGTTAGCACCTATATATGGTGCGGCAGGCAAGATTCCTGATAGAGGTATGGTACAGGAATTGCTGGTAGATATCATGGACGGTACTTGTTAG 1317 0.4207 MEVLEKMRDEKRNDVIWQGRCSGTVYIGGSEFDAHFSLINEACSMFAHTNPLHLDVFQSVAHFEAEVVAMTAALLGGKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKFKKGITIPEMIIPESAHSAYDKAAQYFNIKLWRIPVNKRFQADPKAIRHHINKNTILIVGSAPGFPHGIIDPIEELGNLASSFGICFHVDLCLGGFVLPFARKLGYSIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGEEGYLENTKAIMDVSKRIQEGVSGVCSIGEIPELFIVGRPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICVTLQHLAVVEDFLRDLKDSVMTVKENPGPVSGGLAPIYGAAGKIPDRGMVQELLVDIMDGTC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g2418 438 Gene3D Aspartate Aminotransferase, domain 1 3 401 IPR015422 GO:0003824
Prci9g2418 438 SUPERFAMILY PLP-dependent transferases 4 396 IPR015424 -
Prci9g2418 438 Pfam Pyridoxal-dependent decarboxylase conserved domain 47 320 IPR002129 GO:0016830|GO:0019752|GO:0030170
Prci9g2418 438 FunFam sphingosine-1-phosphate lyase 1 32 296 - -
Prci9g2418 438 FunFam Sphingosine-1-phosphate lyase 1 399 437 - -
Prci9g2418 438 Gene3D - 29 296 IPR015421 GO:0003824
Prci9g2418 438 Gene3D - 402 435 - -
Prci9g2418 438 PANTHER - 2 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g2418 Prci-Chr9 33241010 33254222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g2418 48 398 Calmodulin-binding Proteins AT3G17760 24.796 3.49e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g2418 K01634 - gmx:100794743 779.245